DRSC/TRiP Functional Genomics Resources

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Protein Alignment POU3F1 and pdm2

DIOPT Version :10

Sequence 1:NP_002690.3 Gene:POU3F1 / 5453 HGNCID:9214 Length:451 Species:Homo sapiens
Sequence 2:NP_723763.1 Gene:pdm2 / 34673 FlyBaseID:FBgn0004394 Length:893 Species:Drosophila melanogaster


Alignment Length:327 Identity:133/327 - (40%)
Similarity:165/327 - (50%) Gaps:72/327 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   139 PAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPS 203
            |::||.|..|...|..|         |........||.:|......|.:.       .:.||:.|
  Fly   611 PSLSPVPRHSKSQQRTP---------PNSMTANSLGMSSAVMTPNTPSMQ-------QQPQLQQS 659

Human   204 PPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSSVGEHSDEDAPSSDDLEQFAKQFKQRRIK 268
            .|            ....||..|:|          .:..|.|.|:....::||||||.|||||||
  Fly   660 TP------------KPTSGLTVASA----------MAKLEQSPEETTDLEELEQFAKTFKQRRIK 702

Human   269 LGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDS----SSGSPTN 329
            |||||.|||||:|.||||.||||||.|||||.|||||||||||||.||||:.||    |.|...|
  Fly   703 LGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFN 767

Human   330 LDKIAAQ---------GRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRV 385
            ::.:.:.         ||:||||||||..|:..||..||...||::.||:.|::.|.::|||:||
  Fly   768 INTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLSERLNMDKEVIRV 832

Human   386 WFCNRRQKEKRMTPAAGAGHP---PMDDVYAPGELGPGGGGASPPSAPPPPPPAALHHHHHHTLP 447
            |||||||||||:.|:.....|   |:.. :|.|.                 ||.||:..|.....
  Fly   833 WFCNRRQKEKRINPSLDLDSPTGTPLSS-HAFGY-----------------PPQALNMSHMQMEG 879

Human   448 GS 449
            ||
  Fly   880 GS 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POU3F1NP_002690.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..114
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..154 6/14 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..253 11/66 (17%)
POU 247..321 CDD:197673 57/73 (78%)
Homeodomain 340..396 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..451 14/58 (24%)
pdm2NP_723763.1 PHA03247 <375..675 CDD:223021 20/101 (20%)
POU 691..755 CDD:197673 54/63 (86%)
Homeodomain 787..843 CDD:459649 33/55 (60%)
Blue background indicates that the domain is not in the aligned region.

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