Protein Alignment CG46428 and HMGB5

DIOPT Version :10

• Sequence 1: NP_001369095.1
• Gene: CG46428 / 54520436
• FlyBaseID: FBgn0286931
• Length: 93
• Species: Drosophila melanogaster
• Sequence 2: NP_195282.1
• Gene: HMGB5 / 829709
• AraportID: AT4G35570
• Length: 125
• Species: Arabidopsis thaliana
• Alignment Length: 58
• Identity: 23/58 - (39%)
• Similarity: 34/58 - (58%)
• Gaps: 8/58 - (13%)

  Fly     2 RPSKFPSANPYFIFFDHFR--INLQKRDICHLKPI-SLAKIAGRKWREMTTAQKSVFV 56
            ||.|.||  |:|:|.|.||  .||...|   .|.: ::.:.||:||:.||..:::.||
plant    33 RPKKPPS--PFFVFLDDFRKEFNLANPD---NKSVGNVGRAAGKKWKTMTEEERAPFV 85

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG46428	NP_001369095.1	HMG-box_SF	10..65	CDD:438789	18/50 (36%)
HMGB5	NP_195282.1	HMG-box_AtHMGB1-like	35..95	CDD:438821	21/56 (38%)