DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG46428 and nhp6

DIOPT Version :10

Sequence 1:NP_001369095.1 Gene:CG46428 / 54520436 FlyBaseID:FBgn0286931 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_593314.1 Gene:nhp6 / 2542878 PomBaseID:SPAC57A10.09C Length:108 Species:Schizosaccharomyces pombe


Alignment Length:63 Identity:15/63 - (23%)
Similarity:29/63 - (46%) Gaps:3/63 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PSKFPSANPYFIFFDHFRINLQKRDICHLKPISLAKIAGRKWREMTTAQKSVFVQIAEINRAR 65
            |.:..||   |:||........|.|........|..:.|::|:|:|:.::..:.:.|..::.|
pombe    16 PKRNMSA---FMFFSIENREKMKTDNPDATFGQLGSLLGKRWKELTSTEREPYEEKARQDKER 75

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG46428NP_001369095.1 HMG-box_SF 10..65 CDD:438789 11/54 (20%)
nhp6NP_593314.1 HMG-box_NHP6-like 3..83 CDD:438792 15/63 (24%)

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