Protein Alignment CG46428 and hmg-1.2

DIOPT Version :10

• Sequence 1: NP_001369095.1
• Gene: CG46428 / 54520436
• FlyBaseID: FBgn0286931
• Length: 93
• Species: Drosophila melanogaster
• Sequence 2: NP_001380090.1
• Gene: hmg-1.2 / 175890
• WormBaseID: WBGene00001972
• Length: 235
• Species: Caenorhabditis elegans
• Alignment Length: 86
• Identity: 17/86 - (19%)
• Similarity: 31/86 - (36%)
• Gaps: 20/86 - (23%)

  Fly     5 KFPSANPYFIFFDHFRINLQKRDICHLKPISLAKIAGRKWREMTTAQKSVFVQIAEINRARLRAR 69
            |:|:.|                    ::...::|....||:.|...:|..|.::|:.:..|.:|.
 Worm    66 KYPNEN--------------------VQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAE 110

  Fly    70 GRPSVPVGRVRRCHIKRVYKD 90
            ...:...|.......||..||
 Worm   111 VSVAAYGGEDAMRKRKRAKKD 131

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG46428	NP_001369095.1	HMG-box_SF	10..65	CDD:438789	8/54 (15%)
hmg-1.2	NP_001380090.1	HMG-box_HMGB_rpt1	44..112	CDD:438794	12/65 (18%)
		HMG-box_SF	124..202	CDD:469606	4/8 (50%)