DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG46428 and Dsp1

DIOPT Version :10

Sequence 1:NP_001369095.1 Gene:CG46428 / 54520436 FlyBaseID:FBgn0286931 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_001138203.1 Gene:Dsp1 / 117294 FlyBaseID:FBgn0278608 Length:397 Species:Drosophila melanogaster


Alignment Length:62 Identity:17/62 - (27%)
Similarity:29/62 - (46%) Gaps:9/62 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SANPYFIFFDHFRINLQKRDICHLKPI----SLAKIAGRKWREMTTAQKSVFVQIAEINRAR 65
            |.:.:|.|     .|.::..:..|.|.    .:||..||||.::....|..:..:||.::||
  Fly   278 SLSAFFWF-----CNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKAR 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG46428NP_001369095.1 HMG-box_SF 10..65 CDD:438789 14/58 (24%)
Dsp1NP_001138203.1 HMG-box_HMGB_rpt1 182..250 CDD:438794
HMG-box_NHP6-like 262..342 CDD:438792 17/62 (27%)
Blue background indicates that the domain is not in the aligned region.

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