DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBM47 and MRN1

DIOPT Version :9

Sequence 1:NP_001092104.1 Gene:RBM47 / 54502 HGNCID:30358 Length:593 Species:Homo sapiens
Sequence 2:NP_015140.1 Gene:MRN1 / 855917 SGDID:S000006105 Length:612 Species:Saccharomyces cerevisiae


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBM47NP_001092104.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
hnRNP-R-Q 21..593 CDD:273732
MRN1NP_015140.1 RRM1_MRN1 200..273 CDD:240964
RRM2_MRN1 289..372 CDD:409943
RRM3_MRN1 430..503 CDD:240965
RRM_SF 519..606 CDD:418427
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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