DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBM47 and SPCC1827.05c

DIOPT Version :9

Sequence 1:NP_001092104.1 Gene:RBM47 / 54502 HGNCID:30358 Length:593 Species:Homo sapiens
Sequence 2:NP_588551.1 Gene:SPCC1827.05c / 2539389 PomBaseID:SPCC1827.05c Length:276 Species:Schizosaccharomyces pombe


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBM47NP_001092104.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
hnRNP-R-Q 21..593 CDD:273732
SPCC1827.05cNP_588551.1 RRM 16..>185 CDD:223796
RRM_NIFK_like 106..179 CDD:240753
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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