DRSC/TRiP Functional Genomics Resources

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Protein Alignment phox2bb and Drgx

DIOPT Version :9

Sequence 1:NP_001014818.1 Gene:phox2bb / 544654 ZFINID:ZDB-GENE-050407-3 Length:284 Species:Danio rerio
Sequence 2:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster


Alignment Length:307 Identity:99/307 - (32%)
Similarity:129/307 - (42%) Gaps:108/307 - (35%)


- Green bases have known domain annotations that are detailed below.


Zfish    58 PSLTPGSCS-----LGTLRDHQSSPYAAV-PYKLFTDHGGLNE----KRKQRRIRTTFTSAQLKE 112
            |:|.|  |.     |.|| |:   |:||. ||..::.|..:::    :|||||.|||||..||:|
  Fly     8 PALHP--CGPHPPRLPTL-DY---PFAATHPYTSYSYHPAIHDETFVRRKQRRNRTTFTLQQLEE 66

Zfish   113 LERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAAAAAAAAAKNGTGKKSDS 177
            ||..||:|||||::|||:||:||:||||||||||||||||:||.|| ........:||....|..
  Fly    67 LETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAER-LKDEQRKRENGESSSSLD 130

Zfish   178 REEDSKEAKATDPDSTG--------------------------------------GPG------- 197
            :..||:|   :.||.||                                      .||       
  Fly   131 KLHDSRE---SSPDITGEIDDDMDDLPPRQRSHSPLANGQMEQQHSHSHSHSHSRSPGGGMHLDS 192

Zfish   198 -PNPNPTS------------------NCGGPSPTG-----GQVSATGNGPVEQVKTSVAGMGPTA 238
             .|..|.|                  :.|.|||:|     ......|.|          |.||::
  Fly   193 SDNERPLSSNQLTATPHSASQSLGSISAGSPSPSGMHREREHTPLVGGG----------GQGPSS 247

Zfish   239 PTQGWASAPGTITSIPDSLGGPFASVLSS---LQRQNGAKATLVKTS 282
            |:.      ...|..|..:|||.:....|   ....|.|.:|...|:
  Fly   248 PSN------SRNTDSPIEVGGPMSLTTGSRMAASSNNSASSTPTPTT 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phox2bbNP_001014818.1 Homeobox 102..154 CDD:278475 40/51 (78%)
DrgxNP_001097075.2 Homeobox 56..108 CDD:278475 40/51 (78%)
OAR 428..445 CDD:281777
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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