DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATAD2B and Rpt6

DIOPT Version :9

Sequence 1:XP_011531220.1 Gene:ATAD2B / 54454 HGNCID:29230 Length:1511 Species:Homo sapiens
Sequence 2:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster


Alignment Length:428 Identity:133/428 - (31%)
Similarity:220/428 - (51%) Gaps:54/428 - (12%)


- Green bases have known domain annotations that are detailed below.


Human   248 IQNHHEVST---EGEEEARTSKLLPLEKISIESQEEDGDIEVEEAEGEE-NDRPYNLRQR----K 304
            :.|..|:.:   :| |..|:..:..:|::.:...|:..::...:|:..| |.:...||:.    :
  Fly     3 VTNRMEIESAYHKG-EGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQ 66

Human   305 TVDRYQAPPIVPAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTTSSDEERFERRKSKSMAR 369
            ....|....:.|..:||   .|..:|  |..:..:...|: |..:|.|.:..... |.:|.::  
  Fly    67 EQGSYVGEVVKPMDKKK---VLVKVH--PEGKFVVDLDKN-IDINDVTPNCRVAL-RNESYTL-- 122

Human   370 ARNRCLPMNFRAEDLASGILRERVKVGASLADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPL 434
              ::.||.  :.:.|.|.::.|:|.             |.:  ::.:|||...|..:||::..|:
  Fly   123 --HKILPN--KVDPLVSLMMVEKVP-------------DST--YEMVGGLDKQIKEIKEVIELPV 168

Human   435 LYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALAN--ECSQGDKKVAFFMRKGADCLSKWVGES 497
            .:||:|:...|..|:|.|.||||||||||:|||:|:  ||:       |....|::.:.|::||.
  Fly   169 KHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT-------FIRVSGSELVQKFIGEG 226

Human   498 ERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLAL---MDGLDNRGEIVVI 559
            .|.:|.||..|....|||||.||||.:...|........|.:..|:|.|   :||.:....|.||
  Fly   227 SRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVI 291

Human   560 GATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHTRDWNPKLSDAF-LGELAEKCVGYC 623
            .||||:|.:||||.||||.||:..|..|:::||..||:||:|..|  |:... |.::||...|..
  Fly   292 MATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN--LTRGINLRKIAELMPGAS 354

Human   624 GADIKALCTEAALIALRRRYPQIYASSHKLQLDVSSIV 661
            ||::|.:||||.:.|||.|  :::.:....::.|:.::
  Fly   355 GAEVKGVCTEAGMYALRER--RVHVTQEDFEMAVAKVM 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATAD2BXP_011531220.1 AAA 447..588 CDD:214640 64/145 (44%)
AAA 452..586 CDD:278434 62/138 (45%)
COG5076 866..>1100 CDD:227408
Bromo_AAA 974..1085 CDD:99957
Rpt6NP_608447.1 RPT1 17..403 CDD:224143 130/413 (31%)
SlyX <27..>69 CDD:294687 7/41 (17%)
AAA_16 152..>205 CDD:289934 27/52 (52%)
AAA 185..317 CDD:278434 61/138 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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