DRSC/TRiP Functional Genomics Resources

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Protein Alignment GDAP1 and CAM1

DIOPT Version :10

Sequence 1:NP_061845.2 Gene:GDAP1 / 54332 HGNCID:15968 Length:358 Species:Homo sapiens
Sequence 2:NP_015277.1 Gene:CAM1 / 856059 SGDID:S000005969 Length:415 Species:Saccharomyces cerevisiae


Alignment Length:252 Identity:46/252 - (18%)
Similarity:87/252 - (34%) Gaps:66/252 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    35 FSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGENI-ICEATQIIDYLE 98
            :::.::|..:....:|..:.||.:...:.....|.|.....:||..:..:.. :.||..|..||.
Yeast     7 YANFRIRTWVPRGLVKALKLDVKVVTPDAAAEQFARDFPLKKVPAFVGPKGYKLTEAMAINYYLV 71

Human    99 QTFLDE--RTPRLMPDKESMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYATTRIR 161
            :...|:  :|..|..|.:.....::..::.|.:|   |.    ||                    
Yeast    72 KLSQDDKMKTQLLGADDDLNAQAQIIRWQSLANS---DL----CI-------------------- 109

Human   162 SQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRR 226
             ||.||...||..|..|.                       |.:...:|.::|::|..|..|:  
Yeast   110 -QIANTIVPLKGGAPYNK-----------------------KSVDSAMDAVDKIVDIFENRLK-- 148

Human   227 NEETPEEGQQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERV 283
                    ...:|..|:.:|||: :|.::....|.......| ..:.|.:..::..|
Yeast   149 --------NYTYLATENISLADL-VAASIFTRYFESLFGTEW-RAQHPAIVRWFNTV 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GDAP1NP_061845.2 GST_N_GDAP1 26..98 CDD:239350 12/63 (19%)
GST_C_GDAP1 179..289 CDD:198336 16/105 (15%)
Required for mitochondrial localization 320..358
CAM1NP_015277.1 GST_N_EF1Bgamma 4..73 CDD:239342 13/65 (20%)
GST_C_EF1Bgamma_like 92..214 CDD:198290 29/167 (17%)
EF1G 255..359 CDD:459888
Blue background indicates that the domain is not in the aligned region.

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