DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GDAP1 and TEF4

DIOPT Version :10

Sequence 1:NP_061845.2 Gene:GDAP1 / 54332 HGNCID:15968 Length:358 Species:Homo sapiens
Sequence 2:NP_012842.1 Gene:TEF4 / 853781 SGDID:S000001564 Length:412 Species:Saccharomyces cerevisiae


Alignment Length:81 Identity:18/81 - (22%)
Similarity:28/81 - (34%) Gaps:23/81 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    13 PLRAEGKADAEVKLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLP-LSEHNEP-----WFMRL 71
            ||.|.||:    ..:|..|...:|:...|             .|:|| ..||..|     |.:..
Yeast   254 PLEALGKS----TFVLDDWKRKYSNDDTR-------------PVALPWFWEHYNPEEYSIWKVGY 301

Human    72 NSTGEVPVLIHGENII 87
            ....|:.:.....|::
Yeast   302 KYNDELTLTFMSNNLV 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GDAP1NP_061845.2 GST_N_GDAP1 26..98 CDD:239350 13/68 (19%)
GST_C_GDAP1 179..289 CDD:198336
Required for mitochondrial localization 320..358
TEF4NP_012842.1 GST_N_EF1Bgamma 4..72 CDD:239342
GST_C_EF1Bgamma_like 89..211 CDD:198290
EF1G 253..356 CDD:459888 18/81 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.