DRSC/TRiP Functional Genomics Resources

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Protein Alignment GDAP1 and YGR201C

DIOPT Version :10

Sequence 1:NP_061845.2 Gene:GDAP1 / 54332 HGNCID:15968 Length:358 Species:Homo sapiens
Sequence 2:NP_011717.4 Gene:YGR201C / 853115 SGDID:S000003433 Length:225 Species:Saccharomyces cerevisiae


Alignment Length:256 Identity:52/256 - (20%)
Similarity:84/256 - (32%) Gaps:70/256 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    40 VRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLI--HGENIICEATQIIDYLEQTFL 102
            :|.::....::..:.||.|......:..:.|.....:.|..:  |.|..:.||..|..||.....
Yeast    16 IRTIVPRGLVRSLKLDVKLADPSDAQQLYEREFPLRKYPTFVGPHDEWTLTEAMAIDYYLIHLSS 80

Human   103 DERTPRLMPDKESMYYPR--VQHYRELLDSLPMDAYTHGC-ILHPELTVDSMIPAYATTRIRSQI 164
            |:...|.:...|..:..|  :..:..|.:|   |.....| :..|.:.|    ..|..|..    
Yeast    81 DKEAVRQLLGPEGDFKTRADILRWESLSNS---DFLNEVCEVFFPLIGV----KPYNATEF---- 134

Human   165 GNTESELKKLAEENPD-LQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNE 228
                    |.|.||.| :...|   :||||.                                  
Yeast   135 --------KAARENVDTIVSLY---EKRLKK---------------------------------- 154

Human   229 ETPEEGQQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERVLKRKTF 289
                  ||..:|.:..||||: ::.....|.|:.|....| ..|.|.:..::.||:|.:.|
Yeast   155 ------QQYLVCDDHETLADL-ISAAAFSLGFISFFDETW-RSKHPEVTRWFNRVIKSRFF 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GDAP1NP_061845.2 GST_N_GDAP1 26..98 CDD:239350 12/59 (20%)
GST_C_GDAP1 179..289 CDD:198336 22/110 (20%)
Required for mitochondrial localization 320..358
YGR201CNP_011717.4 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 4..78 CDD:469754 13/61 (21%)
GST_C_EF1Bgamma_like 98..220 CDD:198290 36/174 (21%)
Blue background indicates that the domain is not in the aligned region.

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