DRSC/TRiP Functional Genomics Resources

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Protein Alignment GDAP1 and gdap1

DIOPT Version :10

Sequence 1:NP_061845.2 Gene:GDAP1 / 54332 HGNCID:15968 Length:358 Species:Homo sapiens
Sequence 2:NP_001018511.1 Gene:gdap1 / 553702 ZFINID:ZDB-GENE-050522-424 Length:362 Species:Danio rerio


Alignment Length:321 Identity:253/321 - (78%)
Similarity:285/321 - (88%) Gaps:1/321 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    25 KLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGENIICE 89
            ||||||||.|||||||||.||||.|:||::||||||||||||||||||.|||||||:|..::||:
Zfish    39 KLILYHWTQSFSSQKVRLAIAEKGLQCEDYDVSLPLSEHNEPWFMRLNPTGEVPVLVHDNHVICD 103

Human    90 ATQIIDYLEQTFLDERTPRLMPDKESMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIPA 154
            .|||:|||||.|.||:||:|:|::.|.||.||||||||||||.|||||||||||||:||||.|||
Zfish   104 PTQIMDYLEQNFCDEQTPKLIPEEGSTYYHRVQHYRELLDSLQMDAYTHGCILHPEITVDSHIPA 168

Human   155 YATTRIRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQV 219
            ||||.||:|||||||||||||.|||||::||||||:||||||.||||:|||||:|||||.|||||
Zfish   169 YATTHIRTQIGNTESELKKLAVENPDLKDAYIAKQRRLKSKLFDHDNMKYLKKLLDELENVLDQV 233

Human   220 ETELQRRNEETPEEG-QQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERV 283
            |||||||:||||||| ||.||||:.|::||||||||||||||||.:||.||||.|.|||||||||
Zfish   234 ETELQRRSEETPEEGSQQAWLCGDFFSIADVSLAVTLHRLKFLGLSRRYWGNGMRVNLETYYERV 298

Human   284 LKRKTFNKVLGHVNNILISAVLPTAFRVAKKRAPKVLGTTLVVGLLAGVGYFAFMLFRKRL 344
            |.|.||.:|||||||||||||||||||||||:||..:|.||:|||:.|..|.||:.|:|||
Zfish   299 LDRPTFRRVLGHVNNILISAVLPTAFRVAKKKAPAFVGATLLVGLIGGATYLAFIYFKKRL 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GDAP1NP_061845.2 GST_N_GDAP1 26..98 CDD:239350 56/71 (79%)
GST_C_GDAP1 179..289 CDD:198336 89/110 (81%)
Required for mitochondrial localization 320..358 14/25 (56%)
gdap1NP_001018511.1 GST_N_GDAP1 40..112 CDD:239350 56/71 (79%)
GST_C_family 193..304 CDD:470672 89/110 (81%)

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