DRSC/TRiP Functional Genomics Resources

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Protein Alignment GDAP1 and Gdap1

DIOPT Version :10

Sequence 1:NP_061845.2 Gene:GDAP1 / 54332 HGNCID:15968 Length:358 Species:Homo sapiens
Sequence 2:NP_001101367.1 Gene:Gdap1 / 312890 RGDID:1309005 Length:358 Species:Rattus norvegicus


Alignment Length:358 Identity:332/358 - (92%)
Similarity:345/358 - (96%) Gaps:0/358 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAERQEEQRGSPPLRAEGKADAEVKLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNE 65
            ||.:|:|.|...||||:|...|||:||||||||||||||||||||||||||||||||||||||||
  Rat     1 MARKQDEARSGVPLRAQGPPAAEVRLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNE 65

Human    66 PWFMRLNSTGEVPVLIHGENIICEATQIIDYLEQTFLDERTPRLMPDKESMYYPRVQHYRELLDS 130
            |||||||||||||||||||||||||||||||||||||||||||||||:.||||||||||||||||
  Rat    66 PWFMRLNSTGEVPVLIHGENIICEATQIIDYLEQTFLDERTPRLMPDEGSMYYPRVQHYRELLDS 130

Human   131 LPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSK 195
            |||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
  Rat   131 LPMDAYTHGCILHPELTVDSMIPAYATTRIRGQIGNTESELKKLAEENPDLQEAYIAKQKRLKSK 195

Human   196 LLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGESFTLADVSLAVTLHRLKF 260
            ||||||||||||||||||||||||||||||||||||:||.|||||||||||||||||||||||||
  Rat   196 LLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPDEGNQPWLCGESFTLADVSLAVTLHRLKF 260

Human   261 LGFARRNWGNGKRPNLETYYERVLKRKTFNKVLGHVNNILISAVLPTAFRVAKKRAPKVLGTTLV 325
            |||||||||:|||||||:|||||||||||||||||||||||||||||||||||||||||||:|||
  Rat   261 LGFARRNWGHGKRPNLESYYERVLKRKTFNKVLGHVNNILISAVLPTAFRVAKKRAPKVLGSTLV 325

Human   326 VGLLAGVGYFAFMLFRKRLGSMILAFRPRPNYF 358
            ||||.|:|||||||||:|||:|||:.|||||||
  Rat   326 VGLLVGMGYFAFMLFRRRLGNMILSLRPRPNYF 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GDAP1NP_061845.2 GST_N_GDAP1 26..98 CDD:239350 71/71 (100%)
GST_C_GDAP1 179..289 CDD:198336 105/109 (96%)
Required for mitochondrial localization 320..358 30/37 (81%)
Gdap1NP_001101367.1 GST_N_GDAP1 26..98 CDD:239350 71/71 (100%)
GST_C_GDAP1 179..289 CDD:198336 105/109 (96%)

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