DRSC/TRiP Functional Genomics Resources

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Protein Alignment GDAP1 and eef-1G

DIOPT Version :10

Sequence 1:NP_061845.2 Gene:GDAP1 / 54332 HGNCID:15968 Length:358 Species:Homo sapiens
Sequence 2:NP_505800.1 Gene:eef-1G / 179522 WormBaseID:WBGene00008920 Length:398 Species:Caenorhabditis elegans


Alignment Length:209 Identity:50/209 - (23%)
Similarity:82/209 - (39%) Gaps:48/209 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   129 DSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLAEENPDLQ--EAYIAKQ-- 189
            |:.|.|.:..|  :.|....|:::  :....|...:..|.:.    ||....||  |.|:...  
 Worm    33 DAAPADKFPLG--VTPAFEGDALL--FGAESIGLHLTGTSAN----AETVQWLQFAEGYLLPAVL 89

Human   190 ----KRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGESFTLADVS 250
                ..:.:...|...|:..|..|:...:|||:|..             ::.:|.||..:|||||
 Worm    90 GYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLV-------------KKTYLVGERLSLADVS 141

Human   251 LAVTLHRLKFLGFARRNWGNGKRP--NLETYYERVLKRKTFNKVLGHVNNILISAVLPTAFRVAK 313
            :|:.|    ...|......|.::.  |:..::..|:.:....:|||.|:  |.|:|  ..|..||
 Worm   142 VALDL----LPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVS--LASSV--AQFNQAK 198

Human   314 ---------KRAPK 318
                     |.|||
 Worm   199 FTELSAKVAKSAPK 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GDAP1NP_061845.2 GST_N_GDAP1 26..98 CDD:239350
GST_C_GDAP1 179..289 CDD:198336 26/119 (22%)
Required for mitochondrial localization 320..358
eef-1GNP_505800.1 GST_N_EF1Bgamma 3..77 CDD:239342 10/51 (20%)
GST_C_EF1Bgamma_like 71..188 CDD:198290 32/135 (24%)
EF1G 240..343 CDD:459888
Blue background indicates that the domain is not in the aligned region.

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