DRSC/TRiP Functional Genomics Resources

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Protein Alignment GDAP1 and gdap1

DIOPT Version :10

Sequence 1:NP_061845.2 Gene:GDAP1 / 54332 HGNCID:15968 Length:358 Species:Homo sapiens
Sequence 2:XP_002937122.2 Gene:gdap1 / 100490264 XenbaseID:XB-GENE-978242 Length:350 Species:Xenopus tropicalis


Alignment Length:339 Identity:284/339 - (83%)
Similarity:317/339 - (93%) Gaps:2/339 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    20 ADAEVKLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGE 84
            |..|.|||||||||||||||||||||||:||||||||||||||||||||||||.:||||||:|||
 Frog    13 AGTEGKLILYHWTHSFSSQKVRLVIAEKSLKCEEHDVSLPLSEHNEPWFMRLNPSGEVPVLVHGE 77

Human    85 NIICEATQIIDYLEQTFLDERTPRLMPDKESMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVD 149
            |||||||||.|||||||:||:||||:|::.|||||||||||||||||||||||||||||||||||
 Frog    78 NIICEATQITDYLEQTFIDEKTPRLIPEEGSMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVD 142

Human   150 SMIPAYATTRIRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEK 214
            ||||||||:|||:|||:|||||||||:|||||::||||||||||:||.||||:|:|||||:||||
 Frog   143 SMIPAYATSRIRTQIGSTESELKKLAQENPDLEDAYIAKQKRLKTKLQDHDNIKFLKKILEELEK 207

Human   215 VLDQVETELQRRNEETPEEGQQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGNGKRPNLETY 279
            ||||||||||||||||||||.:.||||:.|:|||||||||||||:||||||||||||||||||.|
 Frog   208 VLDQVETELQRRNEETPEEGSESWLCGQFFSLADVSLAVTLHRLRFLGFARRNWGNGKRPNLEAY 272

Human   280 YERVLKRKTFNKVLGHVNNILISAVLPTAFRVAKKRAPKVLGTTLVVGLLAGVGYFAFMLFRKRL 344
            |||:|:|||||:|||:||||||||||||||||||||||.:||:||:||||||.|||.|:..||||
 Frog   273 YERILQRKTFNRVLGNVNNILISAVLPTAFRVAKKRAPTILGSTLMVGLLAGAGYFFFLCARKRL 337

Human   345 GSMILAFRPRPNYF 358
            .||.|:.:.:  ||
 Frog   338 FSMFLSIKAK--YF 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GDAP1NP_061845.2 GST_N_GDAP1 26..98 CDD:239350 66/71 (93%)
GST_C_GDAP1 179..289 CDD:198336 92/109 (84%)
Required for mitochondrial localization 320..358 21/37 (57%)
gdap1XP_002937122.2 GST_N_GDAP1 19..91 CDD:239350 66/71 (93%)
GST_C_GDAP1 172..282 CDD:198336 92/109 (84%)

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