DRSC/TRiP Functional Genomics Resources

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Protein Alignment POLH and Polh

DIOPT Version :10

Sequence 1:NP_006493.1 Gene:POLH / 5429 HGNCID:9181 Length:713 Species:Homo sapiens
Sequence 2:NP_109640.1 Gene:Polh / 80905 MGIID:1891457 Length:694 Species:Mus musculus


Alignment Length:720 Identity:566/720 - (78%)
Similarity:611/720 - (84%) Gaps:33/720 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWA 65
            ||.||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||
Mouse     1 MAPGQNRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRNMWA 65

Human    66 DDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFAVIERASIDEAYVDLTSAVQERLQ 130
            |||||||||||||||||||||||||||||||||||||||.|||||||||||||:|||||||||||
Mouse    66 DDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSYFAVIERASIDEAYIDLTSAVQERLQ 130

Human   131 KLQGQPISADLLPSTYIEGLPQGPTTAEETVQKEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAV 195
            |||||||||||||||||||||:|| |.|||||||.:|||||.|||||||.|:.|||||:|||||:
Mouse   131 KLQGQPISADLLPSTYIEGLPRGP-TVEETVQKEAIRKQGLLQWLDSLQSDDPTSPDLRLTVGAM 194

Human   196 IVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPIRKIRSLGG 260
            ||||||||||.:|||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   195 IVEEMRAAIESKTGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPIRKIRSLGG 259

Human   261 KLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTIGCSKNF 325
            ||||||||:|||||||:||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   260 KLGASVIEVLGIEYMGDLTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTIGCSKNF 324

Human   326 PGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTRY 390
            ||||||||||||||||||||.|||||||||||||||||||||||||.|||:|||||||||||.||
Mouse   325 PGKTALATREQVQWWLLQLALELEERLTKDRNDNDRVATQLVVSIRFQGDRRLSSLRRCCALPRY 389

Human   391 DAHKMSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSASAPSSSTDITSFLSSDPSSLPKVP 455
            ||||||.|||..|:|||||||||||||||||||||||||||:||.:.||||:|||||.|..||||
Mouse   390 DAHKMSQDAFAAIRNCNTSGIQTEWSPPLTMLFLCATKFSAAAPPACTDITAFLSSDSSCQPKVP 454

Human   456 VTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEASLSSLTAPTQAPMSNSPSKPSLPF 520
            :.|||.:||||||||..:|:|.|||.|||||||::|::||.|...|...|:    ...|||||.|
Mouse   455 IASSETRTQGSGPAVPTSKEAATSLASFFQKAAKKQRMKETSFVPLNTATE----KLSSKPSLVF 515

Human   521 QTSQSTGTEPFFKQKSLLLKQKQLNNSSVSSPQQNPWSNCKALPNSLPTEYPGCVPV-C------ 578
            |:||:||::.|||||||||:..||:||:...|           |.:.|...|.|:|. |      
Mouse   516 QSSQTTGSQSFFKQKSLLLQHTQLSNSAAPDP-----------PQASPAAQPSCLPAECVDSGPD 569

Human   579 EGVSKLEESSKATPAEMDLAHNSQSMHASSASKSVLEVTQKATPNPSLLAAEDQVPCEKCGSLVP 643
            :|..| ..||||...||::|.:|.::..|.|..| .||||:||        ||||.||||.||||
Mouse   570 DGAVK-PVSSKAVSTEMNVAGDSPNVLDSPAYNS-QEVTQRAT--------EDQVLCEKCDSLVP 624

Human   644 VWDMPEHMDYHFALELQKSFLQPHSSNPQVVSAVSHQGKRNPKSPLACTNKRPRPEGMQTLESFF 708
            |||||||.|||||||||||||||.:|.||.:.|||.|||||||||.|.::||.||.|||||||||
Mouse   625 VWDMPEHTDYHFALELQKSFLQPCTSKPQAIPAVSPQGKRNPKSPSASSSKRLRPHGMQTLESFF 689

Human   709 KPLTH 713
            |||||
Mouse   690 KPLTH 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POLHNP_006493.1 PolY_Pol_eta 10..428 CDD:176456 391/417 (94%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 441..472 22/30 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 495..527 13/31 (42%)
zf_UBZ 631..661 CDD:465769 26/29 (90%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 677..705 20/27 (74%)
PIP-box. /evidence=ECO:0000269|PubMed:15149598, ECO:0000269|PubMed:16357261 701..708 6/6 (100%)
PolhNP_109640.1 PolY_Pol_eta 10..427 CDD:176456 391/417 (94%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 565..598 10/33 (30%)
zf_UBZ 612..642 CDD:465769 26/29 (90%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 651..694 31/42 (74%)
PIP-box. /evidence=ECO:0000250|UniProtKB:Q9Y253 682..689 6/6 (100%)

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