DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment POLH and PolH

DIOPT Version :10

Sequence 1:NP_006493.1 Gene:POLH / 5429 HGNCID:9181 Length:713 Species:Homo sapiens
Sequence 2:NP_649371.2 Gene:PolH / 40438 FlyBaseID:FBgn0037141 Length:885 Species:Drosophila melanogaster


Alignment Length:905 Identity:263/905 - (29%)
Similarity:401/905 - (44%) Gaps:230/905 - (25%)


- Green bases have known domain annotations that are detailed below.


Human     1 MATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWA 65
            |....||||.||||||||.|||::|:|..||:|.|||||..|:|||||||:|.|||.||||.|..
  Fly    10 MQNKYDRVVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQYNPWRGGGIIAVNYAARAKGVTRHMRG 74

Human    66 DDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDLTSAVQERL 129
            |:||.|||:::|.||...|.||:.:|||:|..||..::.||. ::||||:||||:|:|..|..|:
  Fly    75 DEAKDLCPEIVLCQVPNIREKADTSKYRDAGKEVANVLQRFTQLLERASVDEAYLDITETVNHRM 139

Human   130 QKLQG-----QPISADLLPSTYIEGLPQ-------------GPTTAEETVQKEGMRKQGLFQWLD 176
            |::|.     ||   ..|.:|:..|.|.             .|...:|..|..          .|
  Fly   140 QQMQSGAFALQP---QELVNTFAVGYPSIGDYVNKITNRFANPYMDDERYQMS----------YD 191

Human   177 SLQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHG 241
            ...:..:...|::|.:||.:..|:|||:::|||::|||||:|||:|||||.|:||||:||::...
  Fly   192 QNDLPAVRQSDIRLLIGASVAGEVRAAVKKETGYECSAGIAHNKILAKLAAGMNKPNKQTILPLT 256

Human   242 SVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIE 306
            ....||..:|:.||:.||||.|..|.|.|||::||::.:|:|..||..|.||||:||:.:.|||:
  Fly   257 ETASLFDSLPVGKIKGLGGKFGEVVCETLGIKFMGQVVKFSEVDLQRKFDEKNGTWLFNISRGID 321

Human   307 HDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVVSI- 370
            .:.|.||...|:|||.|.|||:..:...:.:|.||.:|:.|:.:||.||..:|:|.|..:||.. 
  Fly   322 LEAVTPRFYSKSIGCCKKFPGRNNITGLKTLQHWLGELSSEINDRLEKDFIENNRRAKHMVVQYV 386

Human   371 -RVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTS-----GIQTEWSPPLTMLFLCATKF 429
             .:.|::..||  |..||..||...:...:..:|| .||.     |.::..:..:..|.:...||
  Fly   387 QDIDGEEVASS--RSTALRDYDQESIVRLSLDLIK-ANTKTFLRPGSESALNNAIKFLGISVGKF 448

Human   430 SASAPSSSTDITSFLSS-----------DPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESF 483
            . :..|....:....::           :|..||||.:...:.:|.            ...::||
  Fly   449 E-TVSSGQNKLQEMFANQAAKKRRVSGDEPGQLPKVEMEKKQKQTD------------EFKMKSF 500

Human   484 FQKAAERQKVKEASLSSLTAPTQAPMSNSPSK-----------PSLPFQTSQSTGTEPFFKQK-- 535
            |....:..|.::|....::|...|..:.:|:|           .::..:.:..|.|...||:.  
  Fly   501 FANYLQGAKKEDAKADGISANPLAAAAGAPNKNFVEEYKHKLHAAVRTEGTVLTSTPAEFKESFF 565

Human   536 SLLLKQ------------------------------------------------------KQLNN 546
            |..|||                                                      |....
  Fly   566 SQYLKQQKKTGQQGSVTSREDSLDVQELAEELDAIEADNSKDFEEDTEEETELTSDTHMSKPEGQ 630

Human   547 SSVSSPQQNPWSNCKALPNSLPTEYPGCVP-------------------VCEGVS---------- 582
            ||.:..:|:|.:...:..|.|..| .|.||                   :...||          
  Fly   631 SSDAGQEQDPNTLNDSTGNDLYVE-TGIVPPTLTEDELKPSTSKRKFDEIESSVSNYKECYVEFA 694

Human   583 ------------KLEESSKATPAEM-------------DLAHNSQSMHASSASKSVLEVTQKATP 622
                        |.::.....|.|:             :|:...:|......::|..:::.|.||
  Fly   695 VPNLRTDILPTIKCDQCGANIPDEVKSLQTHRDHHFAQELSRTLRSTEREERTQSRQKISLKPTP 759

Human   623 ------------------NPS--------LLAAEDQVP-------CEKCGSLVPVWDMPEHMDYH 654
                              .||        ....::|.|       |.:|.:.:...|||||:|||
  Fly   760 PKKSKKTAGSGSSSYSTAPPSNSITKFFRAKPTQEQAPSDPQMNQCPECKAFIKCVDMPEHLDYH 824

Human   655 FALELQKSFLQPHSSNPQVVSAVSHQGKRNPKSPLACTNKR------PRPEGMQTLESFF 708
            .|..||:...|   .:.:..:|..::.|.:|..|...:.|:      ....|.:|:..||
  Fly   825 VARNLQRELNQ---QDLRTRTAALNKEKISPVQPKKQSQKKLNSTISASSSGTKTIAQFF 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POLHNP_006493.1 PolY_Pol_eta 10..428 CDD:176456 183/443 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 441..472 6/41 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 495..527 5/42 (12%)
zf_UBZ 631..661 CDD:465769 14/36 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 677..705 6/33 (18%)
PIP-box. /evidence=ECO:0000269|PubMed:15149598, ECO:0000269|PubMed:16357261 701..708 1/6 (17%)
PolHNP_649371.2 PolY_Pol_eta 20..447 CDD:176456 183/442 (41%)
zf_UBZ 705..736 CDD:465769 4/30 (13%)
zf_UBZ 805..832 CDD:465769 13/26 (50%)

Return to query results.
Submit another query.