DRSC/TRiP Functional Genomics Resources

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Protein Alignment POLH and eso1

DIOPT Version :10

Sequence 1:NP_006493.1 Gene:POLH / 5429 HGNCID:9181 Length:713 Species:Homo sapiens
Sequence 2:NP_596778.1 Gene:eso1 / 2539666 PomBaseID:SPBC16A3.11 Length:872 Species:Schizosaccharomyces pombe


Alignment Length:740 Identity:183/740 - (24%)
Similarity:296/740 - (40%) Gaps:208/740 - (28%)


- Green bases have known domain annotations that are detailed below.


Human     7 RVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKL 71
            ||||.:|.|.|:.|||..:.....:.|.||.|::     |:|||:|.|||..::|.....:|||.
pombe    27 RVVAHIDQDAFYAQVESVRLGLDHSVPLAVQQWQ-----GLIAVNYAARAANISRHETVTEAKKK 86

Human    72 CPDLLLAQVR-----ESRGKAN-----------LTKYREASVEVMEIMSRFA-VIERASIDEAYV 119
            ||:|..|.|:     ||..|.:           |..||..||:::.|:.:.| |:::|||||.::
pombe    87 CPELCTAHVKTWKAGESEAKYHENPNPNYYKTCLDPYRHESVKILNIIKKHAPVVKKASIDECFI 151

Human   120 DLTSAVQERLQKLQGQPISADLLPSTYIE-GLPQGP----------TTAEETVQ--KEGMRKQGL 171
            :|||.|:..:  |:..|...  :||.... .|||.|          ...||.|.  ||...:   
pombe   152 ELTSDVKRIV--LEEYPYLK--IPSEDSNVALPQAPVLLWPAEFGMVIEEEVVDRTKEDYER--- 209

Human   172 FQWLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQT 236
             .|           .|:.|...|.||:|:|..|..:..:.||||:|.|.:|:||....||||:||
pombe   210 -DW-----------DDVFLFYAAKIVKEIRDDIYLQLKYTCSAGVSFNPMLSKLVSSRNKPNKQT 262

Human   237 LVSHGSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAM 301
            :::..::......:.|..||.||||.|..:|.:||.:.:.::...:...|....|:.||..::.:
pombe   263 ILTKNAIQDYLVSLKITDIRMLGGKFGEEIINLLGTDSIKDVWNMSMDFLIDKLGQTNGPLVWNL 327

Human   302 CRGIEHDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQL 366
            |.||::..:..:...|::..:|||..:...:..:.:.|:.: .|.:|..|..:            
pombe   328 CHGIDNTEITTQVQIKSMLSAKNFSQQKVKSEEDAINWFQV-FASDLRSRFLE------------ 379

Human   367 VVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATKFSA 431
                       |..:||                                  |.|   :|.|.   
pombe   380 -----------LEGMRR----------------------------------PKT---ICLTV--- 393

Human   432 SAPSSSTDITSFLSSDPSSLPKVPVTSSEAKTQGSGPAVTATKKATTSLESFFQKAAERQKVKEA 496
                    ::.||....||  ::|: :.:..||.   .|.||.|....|:..|.           
pombe   394 --------VSRFLRKSRSS--QIPM-NVDISTQF---IVEATSKLLRQLQQEFD----------- 433

Human   497 SLSSLTAPTQAPMSNSPSKPSLPFQT-----SQSTGTEPFFKQKSLLLKQKQLNNSSVSSPQQNP 556
                     ..|:||.    |:.||.     ..|.|.|.|.|:.:    .:...::|||      
pombe   434 ---------VYPISNL----SISFQNIIEVDRNSRGIEGFLKKSN----DEIYMSTSVS------ 475

Human   557 WSNCKALPNSLPTEYPGCVPVCEGVSKL------EESSKATPAEMDLAHNSQSMHASSASKSVLE 615
                               |..||.:||      |.:|....:|.|:  .|.........|.:.:
pombe   476 -------------------PSIEGRAKLLNENMRENNSFELSSEKDI--KSPKRLKRGKGKGIFD 519

Human   616 VTQK-ATPNPSLLAAEDQVPCEKCGSLVPVWDMPEHMDYHFALELQK-----SFLQPHSSNPQVV 674
            :.|: |...|:..:|::...||:|...:.:.:..||.|||.||.:.:     :.:.|....|:.|
pombe   520 MLQQTAVSKPTENSADETYTCEECEQKITLSERNEHEDYHIALSISRKERYNNLVPPSHDKPKQV 584

Human   675 SAVSHQGKRNPK--SPLA--CTNKR 695
            ...::..|...|  :||:  ..|||
pombe   585 KPKTYGRKTGSKHYAPLSDETNNKR 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POLHNP_006493.1 PolY_Pol_eta 10..428 CDD:176456 117/447 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 441..472 8/30 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 495..527 7/36 (19%)
zf_UBZ 631..661 CDD:465769 10/29 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 677..705 7/23 (30%)
PIP-box. /evidence=ECO:0000269|PubMed:15149598, ECO:0000269|PubMed:16357261 701..708
eso1NP_596778.1 PolY_Pol_eta 30..446 CDD:176456 136/541 (25%)
zf_UBZ 536..567 CDD:465769 10/30 (33%)
zf-C2H2_3 643..679 CDD:464013
Acetyltransf_13 797..853 CDD:464015
Blue background indicates that the domain is not in the aligned region.

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