DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TSPEAR and clos

DIOPT Version :9

Sequence 1:NP_659428.2 Gene:TSPEAR / 54084 HGNCID:1268 Length:669 Species:Homo sapiens
Sequence 2:NP_001097246.3 Gene:clos / 5740204 FlyBaseID:FBgn0261016 Length:1836 Species:Drosophila melanogaster


Alignment Length:425 Identity:94/425 - (22%)
Similarity:147/425 - (34%) Gaps:155/425 - (36%)


- Green bases have known domain annotations that are detailed below.


Human   268 RVTLGPQPPCTEVEDAQFWFDASRKGLYLCVGNEWVSVLAAKERLDYVEEHQNLSTNSETLGIEV 332
            |.|..||    ..:.|.|.||          |.|.|:.:.....||                |.:
  Fly    45 RATAVPQ----FFDQASFSFD----------GLERVASVPVSFPLD----------------ICI 79

Human   333 FRIPQVGLFVATANRKATS-----AVYKW--TEEKFVSYQNIPTHQAQAWRHFTIGKKIFLAVA- 389
            .::|.|.  .|||..|..:     |||.|  .|:.:.....:.|.:|.|........:.::||: 
  Fly    80 LQLPTVK--YATALHKNAAGVRHFAVYTWRPAEQDYQLLVELETPKAVALDCLAFAGRGYVAVSY 142

Human   390 NF-EPDEKGQEFSVIY----------------------------------------------KWS 407
            |. ||..:.:|.|.||                                              ||.
  Fly   143 NLTEPVSQAREGSPIYEISPETGIRTVQYFSGTHLRGMYLRISSQELTLLHAFESNAQCPYFKWM 207

Human   408 HRKLKFTPYQSIATHSARDWEAFEVDGEHFLAVANHREGDNHN-IDSVIYKWNPATRLFEANQTI 471
            .:  .|....:|....||..|||.:|...::||||:.:.:... ..|.|::|:..::.|:..|.:
  Fly   208 GK--SFQRLGAIHCSKARRMEAFGIDYTDYVAVANYADAEGRTATHSEIFRWDAKSQRFQLFQRL 270

Human   472 ATSGAYDWEFFS-----VGPYSFLVVANTFNGTSTKV---HSHLYIRLLGSFQLFQSFPTFGAAD 528
            .::||.|.::||     |....||::.||..||..:|   .:.:|:...|.|..:|.. :|.|.:
  Fly   271 RSNGAVDVKYFSLPVNEVSRRHFLILGNTIGGTGAEVGDADTVIYVFEKGQFVPYQRL-SFYALE 334

Human   529 WEV---FQIGERIFLAVANSHSYDVEMQVQNDSYVINSVIYELNVTAQAFVKFQDILTCSALDWE 590
            ..:   ..|.|:..|.|| .:..||:             ||.||                  ||.
  Fly   335 RVLPVQHSISEKFLLLVA-CNKQDVK-------------IYNLN------------------DWR 367

Human   591 F---------------------FSVGEDYFLVVAN 604
            |                     :..|:..:||:||
  Fly   368 FEESKVQFTEGALSRGVARMRSYEEGDQSYLVIAN 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TSPEARNP_659428.2 LamG <82..222 CDD:304605
EAR 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 313..358 12/51 (24%)
EAR 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 360..408 14/95 (15%)
EPTP 360..407 CDD:281697 13/94 (14%)
EAR 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 412..460 15/48 (31%)
EPTP 412..459 CDD:281697 14/47 (30%)
EAR 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 464..506 15/49 (31%)
EPTP 465..501 CDD:281697 14/40 (35%)
EAR 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 514..570 14/58 (24%)
EPTP 514..569 CDD:281697 13/57 (23%)
EAR 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 574..622 8/52 (15%)
EPTP 575..620 CDD:281697 8/51 (16%)
EAR 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 625..668
EPTP 625..665 CDD:281697
closNP_001097246.3 EPTP 263..315 CDD:281697 15/51 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158850
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto90557
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15261
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4919
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
65.930

Return to query results.
Submit another query.