DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PMP2 and fabp

DIOPT Version :10

Sequence 1:NP_002668.1 Gene:PMP2 / 5375 HGNCID:9117 Length:132 Species:Homo sapiens
Sequence 2:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster


Alignment Length:112 Identity:59/112 - (52%)
Similarity:76/112 - (67%) Gaps:2/112 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     5 FLG-TWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKNTEISFKLG 68
            |:| .:||..|||||:|||.|||||.|||:||...|||.::.:||..|:.|.||||.:.||||||
  Fly     3 FVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLG 67

Human    69 QEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMV 115
            .||:|.|.|.|..|||:||....|.|.|:.| |.|||.|:..:.:::
  Fly    68 VEFDEETLDGRNVKSIITLDGNKLTQEQKGD-KPTTIVREFTDNELI 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMP2NP_002668.1 FABP8 3..131 CDD:381244 59/112 (53%)
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 59/112 (53%)

Return to query results.
Submit another query.