DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PMM2 and Pmm2

DIOPT Version :10

Sequence 1:NP_000294.1 Gene:PMM2 / 5373 HGNCID:9115 Length:246 Species:Homo sapiens
Sequence 2:NP_001100443.1 Gene:Pmm2 / 302915 RGDID:1309366 Length:242 Species:Rattus norvegicus


Alignment Length:238 Identity:224/238 - (94%)
Similarity:232/238 - (97%) Gaps:0/238 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     8 LCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENG 72
            |||||:||||||||||||||||.||||||||.||||||||||||:||||||||||||||||||||
  Rat     4 LCLFDMDGTLTAPRQKITKEMDGFLQKLRQKTKIGVVGGSDFEKLQEQLGNDVVEKYDYVFPENG 68

Human    73 LVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCS 137
            |||||||||||:||||.|||||:||||||||||||||||||||||||||||||||||||||||||
  Rat    69 LVAYKDGKLLCKQNIQGHLGEAVIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCS 133

Human   138 QEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYK 202
            ||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||:|..|||
  Rat   134 QEERIEFYELDKKEHIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHLEQAGYK 198

Human   203 TIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245
            ||||||||||||||||||||||||:||:||||||||||||.||
  Rat   199 TIYFFGDKTMPGGNDHEIFTDPRTVGYTVTAPEDTRRICEELF 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMM2NP_000294.1 HAD_PMM 8..244 CDD:319784 222/235 (94%)
Pmm2NP_001100443.1 HAD_PMM 4..240 CDD:319784 222/235 (94%)

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