DRSC/TRiP Functional Genomics Resources

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Protein Alignment PMM2 and pmm1

DIOPT Version :10

Sequence 1:NP_000294.1 Gene:PMM2 / 5373 HGNCID:9115 Length:246 Species:Homo sapiens
Sequence 2:NP_594325.1 Gene:pmm1 / 2541674 PomBaseID:SPAC1556.07 Length:257 Species:Schizosaccharomyces pombe


Alignment Length:239 Identity:141/239 - (58%)
Similarity:173/239 - (72%) Gaps:5/239 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     8 LCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQL---GNDVVEKYDYVFP 69
            |.|||||||||..|..::.||.:.||.||:.:.||.|||||..|.||||   |.:|::.:||.|.
pombe    15 LVLFDVDGTLTPARLSVSPEMLETLQNLRKVVAIGFVGGSDLSKQQEQLSVNGENVIDSFDYAFA 79

Human    70 ENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGR 134
            ||||.||:.|:.|..|:..:.|||...|.|:|:||.|||.:.:|.||||||||||||:|:||:||
pombe    80 ENGLTAYRYGQQLASQSFIAWLGEEKYQKLVNFCLHYIADLDIPVKRGTFIEFRNGMINISPVGR 144

Human   135 SCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVEND 199
            :.:.|||.||...||...||...|..||::|...||||||||||||||||.||||.|||:|||.:
pombe   145 NANTEERNEFERFDKGRKIRATMVDVLREKFKDYGLTFSIGGQISFDVFPAGWDKTYCLQHVEKE 209

Human   200 GYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICEL 243
            |:.||:||||||..||||:|||.||||:|:|||.|:||  |.||
pombe   210 GFDTIHFFGDKTYKGGNDYEIFVDPRTIGHSVTNPDDT--IAEL 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMM2NP_000294.1 HAD_PMM 8..244 CDD:319784 141/239 (59%)
pmm1NP_594325.1 OtsB 12..>48 CDD:441481 17/32 (53%)
PMM 35..257 CDD:397425 129/219 (59%)

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