DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PMM2 and pmm1

DIOPT Version :10

Sequence 1:NP_000294.1 Gene:PMM2 / 5373 HGNCID:9115 Length:246 Species:Homo sapiens
Sequence 2:NP_001106421.1 Gene:pmm1 / 100127589 XenbaseID:XB-GENE-974466 Length:246 Species:Xenopus tropicalis


Alignment Length:238 Identity:181/238 - (76%)
Similarity:218/238 - (91%) Gaps:0/238 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     8 LCLFDVDGTLTAPRQKITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENG 72
            ||||||||||||.|||:||:|.:||::||:::|:||||||||||::||||:|||||:||||.|||
 Frog     7 LCLFDVDGTLTAARQKVTKDMAEFLEELRKRVKVGVVGGSDFEKIKEQLGDDVVEKFDYVFAENG 71

Human    73 LVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCS 137
            ||||||||.||:|:|.:||||.|:||:||||||||||:|||||||||:||||||||||||||:|:
 Frog    72 LVAYKDGKFLCKQSIHAHLGEDLLQDIINYCLSYIAKLKLPKKRGTFVEFRNGMLNVSPIGRNCT 136

Human   138 QEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYK 202
            ||||||||||||||..|.||||:|::||:|:||||||||||||||||.||||.:||..:||:|:.
 Frog   137 QEERIEFYELDKKEQFRDKFVAELQREFSGRGLTFSIGGQISFDVFPTGWDKTFCLGILENEGFS 201

Human   203 TIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245
            .||||||||||||||:||:||.||:|:|||:|.:||.||..||
 Frog   202 KIYFFGDKTMPGGNDYEIYTDSRTIGHSVTSPGETRTICTELF 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMM2NP_000294.1 HAD_PMM 8..244 CDD:319784 179/235 (76%)
pmm1NP_001106421.1 HAD_PMM 7..243 CDD:319784 179/235 (76%)

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