DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dhap-at and Gpam

DIOPT Version :9

Sequence 1:NP_001262957.1 Gene:Dhap-at / 53586 FlyBaseID:FBgn0040212 Length:807 Species:Drosophila melanogaster
Sequence 2:XP_036017329.1 Gene:Gpam / 14732 MGIID:109162 Length:844 Species:Mus musculus


Alignment Length:904 Identity:187/904 - (20%)
Similarity:341/904 - (37%) Gaps:271/904 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RQSTSSGTVEGESSEQEEQKT---------PSAAEYMRN------------------FKNIIAPG 44
            :|..:.|.....|:.:|...|         ||::||...                  |::.....
Mouse     4 QQPAAHGLGLARSAMEESSVTVGTIDVSYLPSSSEYSLGRCKHTSEDWVDCGFKPTFFRSATLKW 68

  Fly    45 NEASMTRE--FNPQVAY-----EFEKYLNPQ---------------------------------- 68
            .|:.|:|:  |..:..|     .:|::.||.                                  
Mouse    69 KESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQ 133

  Fly    69 -----------KLKQHVLRSEKLRSILEHYAKE---------SGTPLKQMERQARAIIDEIGLDR 113
                       .:.::||.|.:::..:...|.|         ....:::::|:||.|:.|:....
Mouse   134 ERDVHKGMFATSVTENVLSSSRVQEAIAEVAAELNPDGSAQQQSKAIQKVKRKARKILQEMVATV 198

  Fly   114 NMAIIRWCGIAITAIGKRICDGFY------------VNSASMANVRKDMGKCPVLYLPSHRSYMD 166
            :..:||..|..:.    ::.:.|:            |.:|:..|:       |:|:||.|||::|
Mouse   199 SPGMIRLTGWVLL----KLFNSFFWNIQIHKGQLEMVKAATETNL-------PLLFLPVHRSHID 252

  Fly   167 FILMSYICYYYDIEIPGIAAGMDFH-SMFGMGTMLRKTGAFFMRRSFS------NDELYWDIFRE 224
            ::|:::|.:.::|:.|.||:|.:.: .:|  .|::.|.|.||:||...      .|.||..:...
Mouse   253 YLLLTFILFCHNIKAPYIASGNNLNIPVF--STLIHKLGGFFIRRRLDETPDGRKDILYRALLHG 315

  Fly   225 YMYALVANYHIGVEFFIEGTRSRNFKALVPKIGLLSMALLPYFTGEVPDVMIVPVSVAYERVLEE 289
            ::..|:..... :|.|:||||||:.|....:.||||:.:....:..:||::::||.::|:|::|.
Mouse   316 HVVELLRQQQF-LEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEG 379

  Fly   290 QLFVYELLGVPKPKES----TKGFFKALKIIDERFGKMFLDFGEPISVKEFFGHDSAQ------R 344
            . :..|.||.||..||    .:|..:.|:   :.:|.:.:||.:|.|:||:....|.:      .
Mouse   380 H-YNGEQLGKPKKNESLWSVARGVIRMLR---KNYGYVRVDFAQPFSLKEYLEGQSQKPVSAPLS 440

  Fly   345 MQRA-----------GVGGHLQKLNRQEV----------ELVKQLANEIIYQQQRRIVISTFNL- 387
            :::|           .|....|.|:..|.          .|:..||..|::...:...|.:.:: 
Mouse   441 LEQALLPAILPSRPNDVADEHQDLSSNESRNPADEAFRRRLIANLAEHILFTASKSCAIMSTHIV 505

  Fly   388 --LSLY------YASQLYAQRSVTLDE-LARG------------VLHLKRIFEQLG-----AHVS 426
              |.||      :.|.|.....|..:| |||.            |:|   ..:.||     .|.|
Mouse   506 ACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMH---AIQLLGNCVTITHTS 567

  Fly   427 ------TTPSSIKADVIDAVEIHSN-ILH------------FATGRLQFTPMAAKQLAEQIDVKR 472
                  .|||:....|.: :..:|| :||            :|....:.:..:|..|...|..::
Mouse   568 RKDEFFITPSTTVPSVFE-LNFYSNGVLHVFIMEAIIACSIYAVLNKRCSGGSAGGLGNLISQEQ 631

  Fly   473 L--KAHALCPQTMAVAVPMLALQLYINPCMFWLARPAYLLLAALKEQKNQQKQSTDIS---YDAS 532
            |  ||.:||..........|..|.:...|...:.:.....:..:.||.:|:..|..::   :|..
Mouse   632 LVRKAASLCYLLSNEGTISLPCQTFYQVCHETVGKFIQYGILTVAEQDDQEDVSPGLAEQQWDKK 696

  Fly   533 LCALH--AHVTTMDALFQHE-----FIIESNREAAEFETHLQLLLDERVVEVETSGRINVQDNEC 590
            |..|:  :.....|:.|..|     ..:..::|..:|.|.||.||.. ::|..:|..|.|.:   
Mouse   697 LPELNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGP-LLEAYSSAAIFVHN--- 757

  Fly   591 SHVILAALAPFLCLYYQLVVTLRKIPLELEFSNKELLVRVQQHVEQLLQQPGASASHVHPYCLAL 655
                                          ||..   |...:::::|           |.|.:..
Mouse   758 ------------------------------FSGP---VPESEYLQKL-----------HRYLITR 778

  Fly   656 DNLNIAIYALIQRGYLVKS-----RDSGQMKIASTPGKCLRELETQLLEYCQLMPFAQY 709
            ...|:|:||......|||:     :|.|..|........:.||.:..|..|......:|
Mouse   779 TERNVAVYAESATYCLVKNAVKMFKDIGVFKETKQKRVSVLELSSTFLPQCNRQKLLEY 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhap-atNP_001262957.1 LPLAT_DHAPAT-like 133..338 CDD:153255 67/227 (30%)
GpamXP_036017329.1 PlsB <145..680 CDD:225488 129/556 (23%)
LPLAT_DHAPAT-like 218..428 CDD:153255 66/223 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2937
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D129142at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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