DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gclc and Gclc

DIOPT Version :9

Sequence 1:NP_001285001.1 Gene:Gclc / 53581 FlyBaseID:FBgn0040319 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_036947.1 Gene:Gclc / 25283 RGDID:619868 Length:637 Species:Rattus norvegicus


Alignment Length:699 Identity:373/699 - (53%)
Similarity:473/699 - (67%) Gaps:85/699 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLSEGSPLSWEETKALADHVREHGVNQFINLYHRLKDRQGDILKWGDEVEYIIVKFDDEQKVA 65
            |||||:|||||||||:..|||||.||:.||:::||.:|||..|:|||||||||::|.||.|.:..
  Rat     1 MGLLSQGSPLSWEETQRHADHVRRHGILQFLHIYHAVKDRHKDVLKWGDEVEYMLVSFDHENRKV 65

  Fly    66 RVALRAQDLLAQLNEK-ELADPNGVKSLWRPEYGAYMIEGTPGKPFGGLMAHFNLVEANMRYRRE 129
            ::.|...|:|..|.|| |..:||. .:|||||||:||||||||:|:||.|:.||.||.|||.||:
  Rat    66 QLLLNGGDVLETLQEKGERTNPNH-PTLWRPEYGSYMIEGTPGQPYGGTMSEFNTVEDNMRKRRK 129

  Fly   130 EVTELLAKDECVMSITNFPRLGAPNFTYPLAQPRPEDPLSSARSLYFPDEAIFPGHPRFKTLTRN 194
            |.|.:|.:.:.:.:||:|||||.|.||.|..:|.||:. .:::||:|||||| ..||||.|||||
  Rat   130 EATSVLGEHQALCTITSFPRLGCPGFTLPEHRPNPEEG-GASKSLFFPDEAI-NKHPRFGTLTRN 192

  Fly   195 IRKRRGEKVSIKLKVFKDTKTKLP-VEGAPPGE-------PDVVLLDAMGFGMGCCCLQLTFQAC 251
            ||.||||||.|.:.:|||..|..| ||..|..|       ||.:.:||||||||.||||:|||||
  Rat   193 IRHRRGEKVVINVPIFKDKNTPSPFVETFPEDEEASKASKPDHIYMDAMGFGMGNCCLQVTFQAC 257

  Fly   252 NITEARRLYDQLAPLCPIMLALTAASPIYRGYLTESDCRWNVISSSVDCRTEEERGLAPLDQQKF 316
            :|:|||.||||||.:|||::||:||||.||||:::.||||.|||:|||.||.|||||.||...:|
  Rat   258 SISEARYLYDQLATICPIVMALSAASPFYRGYVSDIDCRWGVISASVDDRTREERGLEPLKNNRF 322

  Fly   317 RIAKSRYDSIDSYLSPEGAKYNDVPLTYDEKVYQRLVEGGIDHLLAQHVAHLFIRDTVSLFSEKV 381
            :|:||||||||||||..|.||||:.||.|.::|::|:|.|||||||||||||||||.::||.||:
  Rat   323 KISKSRYDSIDSYLSKCGEKYNDIDLTIDTEIYEQLLEEGIDHLLAQHVAHLFIRDPLTLFEEKI 387

  Fly   382 HQNDNEDTDHFENIQSTNWQTMRFKPPPPNSSIGWRVEFRPCEAQISDFENAAIVCFVVLLTRVI 446
            |.:|..::|||||||||||||||||||||||.|||||||||.|.|::||||:|.|.|||||||||
  Rat   388 HLDDANESDHFENIQSTNWQTMRFKPPPPNSDIGWRVEFRPMEVQLTDFENSAYVVFVVLLTRVI 452

  Fly   447 LSYQLNFLTPISKVDENMQTAQKRDACRKEKFWFRKSSKTTEQRAAKAQAQAQAQAKAQAQTNGK 511
            |||:|:||.|:|||||||:.||:|||..:..|:|||.                            
  Rat   453 LSYKLDFLIPLSKVDENMKVAQERDAVLQGMFYFRKD---------------------------- 489

  Fly   512 ATLNGNGLANGNGNGSENSDQEEQQPLTNGSAKMNGHGSGTTNGTNGSSNGSSNGTDSDHTDTDD 576
            ....||.:.:|......:|:...::                                        
  Rat   490 ICKGGNAVVDGCSKAQTSSEPSAEE---------------------------------------- 514

  Fly   577 EENELFQLLSINEIFNGKPNVFPGLVPLIRSYLQSMEVDTDTHCTIEQYLRFIQKRAAGELITTA 641
                 :.|:||:.|.|||..|||||:|::.|||::||||.||.|:|..||:.|:|||:|||:|.|
  Rat   515 -----YTLMSIDTIINGKEGVFPGLIPILNSYLENMEVDVDTRCSILNYLKLIKKRASGELMTVA 574

  Fly   642 TWMREQVLSHPDYKQDSVVSERINYDLLKRIQGIQEGKQVEPALLGQDY 690
            .||||.:.:|||||||||:::.|||.|:.:...|.......|.|||..:
  Rat   575 RWMREFIANHPDYKQDSVITDEINYSLILKCNQIANELCECPELLGSGF 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GclcNP_001285001.1 GCS 232..675 CDD:281119 235/442 (53%)
GclcNP_036947.1 rpsA <26..67 CDD:235775 22/40 (55%)
GCS 236..608 CDD:397275 193/371 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348839
Domainoid 1 1.000 383 1.000 Domainoid score I787
eggNOG 1 0.900 - - E1_KOG3754
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1148
Inparanoid 1 1.050 634 1.000 Inparanoid score I802
OMA 1 1.010 - - QHG54052
OrthoDB 1 1.010 - - D126317at33208
OrthoFinder 1 1.000 - - FOG0005562
OrthoInspector 1 1.000 - - oto96647
orthoMCL 1 0.900 - - OOG6_102076
Panther 1 1.100 - - LDO PTHR11164
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3981
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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