DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jafrac1 and Prdx4

DIOPT Version :9

Sequence 1:NP_001285202.1 Gene:Jafrac1 / 53578 FlyBaseID:FBgn0040309 Length:194 Species:Drosophila melanogaster
Sequence 2:XP_017457660.1 Gene:Prdx4 / 85274 RGDID:620043 Length:282 Species:Rattus norvegicus


Alignment Length:172 Identity:119/172 - (69%)
Similarity:145/172 - (84%) Gaps:1/172 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QLQKPAPAFAGTAVVNGVFKDIKLSDYKGKYLVLFFYPLDFTFVCPTEIIAFSESAAEFRKINCE 67
            ::.||||.:.||||:||.||::||:||:|||||.||||||||||||||||||.:...||:.||.|
  Rat    90 KISKPAPYWEGTAVINGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRIEEFKSINTE 154

  Fly    68 VIGCSTDSQFTHLAWINTPRKQGGLGSMDIPLLADKSMKVARDYGVLDEETGIPFRGLFIIDDKQ 132
            |:.||.||||||||||||||:|||||.:.||||:|.:.::::||||..|::|...|||||||||.
  Rat   155 VVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLNHQISKDYGVYLEDSGHTLRGLFIIDDKG 219

  Fly   133 NLRQITVNDLPVGRSVEETLRLVQAFQYTDKYGEVCP-ANWK 173
            .|||||:|||||||||:||||||||||||||:||..| ::||
  Rat   220 VLRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEDNPRSSWK 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jafrac1NP_001285202.1 PRX_Typ2cys 4..175 CDD:239313 119/171 (70%)
Prdx4XP_017457660.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54000
OrthoDB 1 1.010 - - D1326484at2759
OrthoFinder 1 1.000 - - FOG0000434
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X272
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.730

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