DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prx2 and PER1

DIOPT Version :10

Sequence 1:NP_477510.1 Gene:Prx2 / 53578 FlyBaseID:FBgn0040309 Length:194 Species:Drosophila melanogaster
Sequence 2:NP_175247.1 Gene:PER1 / 841231 AraportID:AT1G48130 Length:216 Species:Arabidopsis thaliana


Alignment Length:167 Identity:47/167 - (28%)
Similarity:79/167 - (47%) Gaps:3/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KLSDY-KGKYLVLFFYPLDFTFVCPTEIIAFSESAAEFRKINCEVIGCSTDSQFTHLAWINTPRK 88
            ||.|| ...:.|||.:|.|||.||.||:.|.::.|.||.|...:::|.|.|...:|..||.....
plant    23 KLHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHKDWIKDIEA 87

  Fly    89 QGGLGSMDIPLLADKSMKVARDYGVLDEETGIPFRGLFIIDDKQNLRQITVNDLPVGRSVEETLR 153
            ......::.|::||.:.::.....::|.....|.|.|.|:.....::...:.....||:::|.||
plant    88 FNHGSKVNYPIIADPNKEIIPQLNMIDPIENGPSRALHIVGPDSKIKLSFLYPSTTGRNMDEVLR 152

  Fly   154 LVQAFQYTDKYGE--VCPANWKPGQKTMVADPTKSKE 188
            .:.:.....|:..  ..|.||||.|..:::.....:|
plant   153 ALDSLLMASKHNNKIATPVNWKPDQPVVISPAVSDEE 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prx2NP_477510.1 PRX_Typ2cys 4..175 CDD:239313 44/152 (29%)
PER1NP_175247.1 PRX_1cys 6..214 CDD:239314 47/167 (28%)

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