DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jafrac1 and prdx6

DIOPT Version :9

Sequence 1:NP_001285202.1 Gene:Jafrac1 / 53578 FlyBaseID:FBgn0040309 Length:194 Species:Drosophila melanogaster
Sequence 2:NP_957099.1 Gene:prdx6 / 393778 ZFINID:ZDB-GENE-040426-1778 Length:222 Species:Danio rerio


Alignment Length:175 Identity:54/175 - (30%)
Similarity:89/175 - (50%) Gaps:11/175 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IKLSDYKG-KYLVLFFYPLDFTFVCPTEIIAFSESAAEFRKINCEVIGCSTDSQFTHLAW---IN 84
            ||..::.| .:.:||.:|.|||.||.||:...::...||:|.:.::|..|.||...|..|   |.
Zfish    22 IKFHEFLGNSWGILFSHPRDFTPVCTTELARAAKLHEEFKKRDVKMIALSIDSVEDHRKWSEDIL 86

  Fly    85 TPRKQGGLGSMDIPLLADKSMKVARDYGVLD----EETGIPF--RGLFIIDDKQNLRQITVNDLP 143
            ...:......|..|::||...:::...|:||    ::.|:|.  |.:|::...:.|:...:....
Zfish    87 AFNQDKACCPMPFPIIADDKRELSVLLGMLDPDERDKDGMPLTARCVFVVGPDKRLKLSILYPAT 151

  Fly   144 VGRSVEETLRLVQAFQYTDKYGEVCPANWKPGQKTMVADPTKSKE 188
            .||:.:|.||:|.:.|.|.......|.:|||||:.||. |:.|.|
Zfish   152 TGRNFDEILRVVDSLQLTATKKVATPVDWKPGQEVMVI-PSLSDE 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jafrac1NP_001285202.1 PRX_Typ2cys 4..175 CDD:239313 46/160 (29%)
prdx6NP_957099.1 AhpC 5..199 CDD:223527 54/175 (31%)
PRX_1cys 6..221 CDD:239314 54/175 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.710

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