DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jafrac1 and Prdx6b

DIOPT Version :9

Sequence 1:NP_001285202.1 Gene:Jafrac1 / 53578 FlyBaseID:FBgn0040309 Length:194 Species:Drosophila melanogaster
Sequence 2:NP_796230.1 Gene:Prdx6b / 320769 MGIID:1336888 Length:224 Species:Mus musculus


Alignment Length:200 Identity:59/200 - (29%)
Similarity:96/200 - (48%) Gaps:24/200 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LQKPAPAFAGTAVVNGVFKDIKLSDYKG-KYLVLFFYPLDFTFVCPTEIIAFSESAAEFRKINCE 67
            |.:.||.|.....:.    .|:..|:.| .:.:||.:|.|||.||.||:...::.|.||.|.|.:
Mouse     7 LGEEAPDFEANTTIG----RIRFHDFLGNSWGMLFSHPKDFTPVCTTELGRAAKLAPEFAKRNVK 67

  Fly    68 VIGCSTDSQFTHLAW---IN-----TPRKQGGLGSMDIPLLADKSMKVARDYGVLD----EETGI 120
            :|..|.||...||||   ||     ||:::     :..|::.||...::..:.:||    :...:
Mouse    68 LIALSVDSVEDHLAWSKDINAYNGATPKEK-----LPFPIIDDKDRDISILFCMLDPVEKDANSM 127

  Fly   121 PF--RGLFIIDDKQNLRQITVNDLPVGRSVEETLRLVQAFQYTDKYGEVCPANWKPGQKTMVADP 183
            |.  ||:||....:.|:...:.....||:.:|.||::.:.|.|:......|.:||.|:..||...
Mouse   128 PLTARGVFIFGPDKKLKMSLLYPNSTGRNFDEILRVIDSLQLTETKPVATPVDWKKGESVMVLPD 192

  Fly   184 TKSKE 188
            ...:|
Mouse   193 LPEEE 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jafrac1NP_001285202.1 PRX_Typ2cys 4..175 CDD:239313 55/185 (30%)
Prdx6bNP_796230.1 AhpC 5..199 CDD:223527 58/199 (29%)
PRX_1cys 7..222 CDD:239314 58/199 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.710

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