DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jafrac1 and tpx1

DIOPT Version :9

Sequence 1:NP_001285202.1 Gene:Jafrac1 / 53578 FlyBaseID:FBgn0040309 Length:194 Species:Drosophila melanogaster
Sequence 2:NP_588430.1 Gene:tpx1 / 2539572 PomBaseID:SPCC576.03c Length:192 Species:Schizosaccharomyces pombe


Alignment Length:188 Identity:122/188 - (64%)
Similarity:155/188 - (82%) Gaps:2/188 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QLQKPAPAFAGTAVVNGVFKDIKLSDYKGKYLVLFFYPLDFTFVCPTEIIAFSESAAEFRKINCE 67
            |:.||||.|.|||||||.|::|||:|||||::.|.||||||||||||||:||||:|::|.:.|.:
pombe     4 QIGKPAPDFKGTAVVNGAFEEIKLADYKGKWVFLGFYPLDFTFVCPTEIVAFSEAASKFAERNAQ 68

  Fly    68 VIGCSTDSQFTHLAWINTPRKQGGLGSMDIPLLADKSMKVARDYGVLDEETGIPFRGLFIIDDKQ 132
            ||..||||:::|||:||||||:||||.::||||||.|.||:||||||.|:.|:.|||||:||.|.
pombe    69 VILTSTDSEYSHLAFINTPRKEGGLGGINIPLLADPSHKVSRDYGVLIEDAGVAFRGLFLIDPKG 133

  Fly   133 NLRQITVNDLPVGRSVEETLRLVQAFQYTDKYGEVCPANWKPGQKTMVADPTKSKEYF 190
            .|||||:|||||||||:|.|||:.|||:.:::||||||||..|..|:  |....::||
pombe   134 VLRQITINDLPVGRSVDEALRLLDAFQFVEEHGEVCPANWHKGSDTI--DTKNPEKYF 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jafrac1NP_001285202.1 PRX_Typ2cys 4..175 CDD:239313 116/170 (68%)
tpx1NP_588430.1 AhpC 1..192 CDD:223527 122/188 (65%)
PRX_Typ2cys 5..176 CDD:239313 116/170 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 188 1.000 Domainoid score I743
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21182
Inparanoid 1 1.050 255 1.000 Inparanoid score I763
OMA 1 1.010 - - QHG54000
OrthoFinder 1 1.000 - - FOG0000434
OrthoInspector 1 1.000 - - otm47123
orthoMCL 1 0.900 - - OOG6_100111
Panther 1 1.100 - - LDO PTHR10681
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1558
SonicParanoid 1 1.000 - - X272
TreeFam 1 0.960 - -
1413.860

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