DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jafrac2 and Prdx3

DIOPT Version :9

Sequence 1:NP_001261350.1 Gene:Jafrac2 / 53577 FlyBaseID:FBgn0040308 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_071985.2 Gene:Prdx3 / 64371 RGDID:620040 Length:257 Species:Rattus norvegicus


Alignment Length:194 Identity:126/194 - (64%)
Similarity:155/194 - (79%) Gaps:1/194 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 YTKAVISKPAPQFEGTAVVNKEIVKLSLSQYLGKYVVLLFYPLDFTFVCPTEIIAFSDRIAEFKK 111
            :|.|| ::.||.|:||||||.|..:|||..:.|||:||.||||||||||||||:||||:..||..
  Rat    62 HTPAV-TQHAPHFKGTAVVNGEFKELSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHD 125

  Fly   112 IKTEVIGVSVDSHFTHLAWINTPRKEGGLGDVKIPLLSDLTHKISKDYGVYLESSGHALRGLFII 176
            :..||:.|||||||:||||||||||.||||.:.|.||||||.:||:||||.|||:|.||||||||
  Rat   126 VNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNITLLSDLTKQISRDYGVLLESAGIALRGLFII 190

  Fly   177 DQTGVLRQITMNDLPVGRSVDETIRLVQAFQYTDTHGEVCPAGWRPGADTIVPNPEEKTKYFAK 240
            |..||::.:::|||||||||:||:|||:|||:.:||||||||.|.|.:.||.|:|....:||.|
  Rat   191 DPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVETHGEVCPANWTPESPTIKPSPTASKEYFEK 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jafrac2NP_001261350.1 PRX_Typ2cys 52..223 CDD:239313 115/170 (68%)
Prdx3NP_071985.2 PRX_Typ2cys 66..236 CDD:239313 116/170 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54000
OrthoDB 1 1.010 - - D1326484at2759
OrthoFinder 1 1.000 - - FOG0000434
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X272
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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