DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jafrac2 and Prdx6b

DIOPT Version :9

Sequence 1:NP_001261350.1 Gene:Jafrac2 / 53577 FlyBaseID:FBgn0040308 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_796230.1 Gene:Prdx6b / 320769 MGIID:1336888 Length:224 Species:Mus musculus


Alignment Length:207 Identity:63/207 - (30%)
Similarity:95/207 - (45%) Gaps:34/207 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VISKPAPQFEGTAVVNKEIVKLSLSQYLGKYVVLLF-YPLDFTFVCPTEIIAFSDRIAEFKKIKT 114
            ::.:.||.||    .|..|.::....:||....:|| :|.|||.||.||:...:....||.|...
Mouse     6 LLGEEAPDFE----ANTTIGRIRFHDFLGNSWGMLFSHPKDFTPVCTTELGRAAKLAPEFAKRNV 66

  Fly   115 EVIGVSVDSHFTHLAW---IN-----TPRKEGGLGDVKIPLLSDLTHKIS----------KDYGV 161
            ::|.:||||...||||   ||     ||:::     :..|::.|....||          ||   
Mouse    67 KLIALSVDSVEDHLAWSKDINAYNGATPKEK-----LPFPIIDDKDRDISILFCMLDPVEKD--- 123

  Fly   162 YLESSGHALRGLFIIDQTGVLRQITMNDLPVGRSVDETIRLVQAFQYTDTHGEVCPAGWRPGADT 226
             ..|.....||:||......|:...:.....||:.||.:|::.:.|.|:|.....|..|:.|...
Mouse   124 -ANSMPLTARGVFIFGPDKKLKMSLLYPNSTGRNFDEILRVIDSLQLTETKPVATPVDWKKGESV 187

  Fly   227 IV-PN-PEEKTK 236
            :| |: |||:.|
Mouse   188 MVLPDLPEEEAK 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jafrac2NP_001261350.1 PRX_Typ2cys 52..223 CDD:239313 56/189 (30%)
Prdx6bNP_796230.1 AhpC 5..199 CDD:223527 62/205 (30%)
PRX_1cys 7..222 CDD:239314 63/206 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.710

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