DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jafrac2 and Prdx2

DIOPT Version :9

Sequence 1:NP_001261350.1 Gene:Jafrac2 / 53577 FlyBaseID:FBgn0040308 Length:242 Species:Drosophila melanogaster
Sequence 2:NP_058865.2 Gene:Prdx2 / 29338 RGDID:3838 Length:198 Species:Rattus norvegicus


Alignment Length:193 Identity:133/193 - (68%)
Similarity:155/193 - (80%) Gaps:0/193 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 AVISKPAPQFEGTAVVNKEIVKLSLSQYLGKYVVLLFYPLDFTFVCPTEIIAFSDRIAEFKKIKT 114
            |.|.||||.|..||||:....::.||.|.||||||.|||||||||||||||||||...:|:|:..
  Rat     6 AHIGKPAPDFTATAVVDGAFKEIKLSDYRGKYVVLFFYPLDFTFVCPTEIIAFSDHAEDFRKLGC 70

  Fly   115 EVIGVSVDSHFTHLAWINTPRKEGGLGDVKIPLLSDLTHKISKDYGVYLESSGHALRGLFIIDQT 179
            ||:||||||.|||||||||||||||||.:.||||:|:|..:|::|||.....|.|.|||||||..
  Rat    71 EVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTKSLSQNYGVLKNDEGIAYRGLFIIDAK 135

  Fly   180 GVLRQITMNDLPVGRSVDETIRLVQAFQYTDTHGEVCPAGWRPGADTIVPNPEEKTKYFAKNN 242
            |||||||:|||||||||||.:||||||||||.|||||||||:||:|||.||.::..:||:|:|
  Rat   136 GVLRQITVNDLPVGRSVDEALRLVQAFQYTDEHGEVCPAGWKPGSDTIKPNVDDSKEYFSKHN 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jafrac2NP_001261350.1 PRX_Typ2cys 52..223 CDD:239313 121/170 (71%)
Prdx2NP_058865.2 PRX_Typ2cys 8..179 CDD:239313 121/170 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54000
OrthoDB 1 1.010 - - D1326484at2759
OrthoFinder 1 1.000 - - FOG0000434
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X272
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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