DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ilk and ilk

DIOPT Version :9

Sequence 1:NP_525001.2 Gene:Ilk / 53573 FlyBaseID:FBgn0028427 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_956865.1 Gene:ilk / 393543 ZFINID:ZDB-GENE-040426-1435 Length:452 Species:Danio rerio


Alignment Length:450 Identity:266/450 - (59%)
Similarity:344/450 - (76%) Gaps:3/450 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDIFHWCREGNSIQVRLWLDETEHDNNLGDDHGFSPLHWVAKEGHAKLVETLLQRGSRVNATNM 65
            |:|||..|||||::.||||||.||:|.|.|||||||||||..:||.:.:|:.|:.||:|:|..|.
Zfish     1 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSGVVDMLIMRGARINVMNR 65

  Fly    66 GDDIPLHLAAAHGHRDVVQMLIKERSDVNAVNEHGNTPLHYACFWGYDMICEDLLNAGAQVGIAN 130
            |||.||||||:|||||::..||:.::|.||.||||||||||||||.:|.:.|||::.||||.|.|
Zfish    66 GDDTPLHLAASHGHRDILAKLIQCKADTNAANEHGNTPLHYACFWAHDQVAEDLVSNGAQVSICN 130

  Fly   131 KDGHTPLEKAKPSLAKRLQDLVEKSGREVKVISFKEQSWQG-LKTRSRDATLSRFKGISMGDLDL 194
            |.|.||::||||.||..|:||.||.|:.:..:.:|:..|:| .:||.|:.||::..||....|::
Zfish   131 KYGETPMDKAKPPLAANLKDLAEKQGQSLSKVPYKDNFWKGTTRTRPRNGTLNKQAGIDYKQLNM 195

  Fly   195 HTKLSVTPSGETWRGRWQKNDVVAKILAVRQCTPRISRDFNEEFPKLRIFSHPNILPIIGACNSP 259
            ..|::...|||.|:||||..::|.|:|.||:.|.|.|||||||:||||||||||:||::|||.||
Zfish   196 LNKINENHSGELWKGRWQGTEIVVKMLHVREWTTRKSRDFNEEYPKLRIFSHPNVLPVLGACQSP 260

  Fly   260 --PNLVTISQFMPRSSLFSLLHGATGVVVDTSQAVSFALDVARGMAFLHSLERIIPTYHLNSHHV 322
              |:.:.|:..||..||::|||..|.:|||.:|||.||||:|.||||||:||.:||.::|||..|
Zfish   261 PAPHPIIITHSMPYGSLYNLLHEGTNLVVDQNQAVKFALDIACGMAFLHTLEPMIPRHYLNSKSV 325

  Fly   323 MIDDDLTARINMGDAKFSFQEKGRIYQPAWMSPETLQRKQADRNWEACDMWSFAILIWELTTREV 387
            |||:|:||||:|.|.|.|||..||:|.|||::||.||:|..:.|..:.||||:|:|:|||.:|||
Zfish   326 MIDEDMTARISMADVKLSFQCPGRMYSPAWVAPEALQKKPEEINRRSADMWSYAVLLWELVSREV 390

  Fly   388 PFAEWSPMECGMKIALEGLRVKIPPGTSTHMAKLISICMNEDPGKRPKFDMVVPILEKMR 447
            |||:.|.||.|||:||||||..||||.|.|:.||:.|||||||.|||||||:|||||||:
Zfish   391 PFADLSNMEIGMKVALEGLRPTIPPGISPHICKLMKICMNEDPAKRPKFDMIVPILEKMQ 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IlkNP_525001.2 ANK 28..140 CDD:238125 68/111 (61%)
ANK repeat 33..64 CDD:293786 16/30 (53%)
Ank_2 38..130 CDD:289560 54/91 (59%)
ANK repeat 66..97 CDD:293786 19/30 (63%)
ANK repeat 99..130 CDD:293786 21/30 (70%)
PK_ILK 196..446 CDD:270959 155/251 (62%)
STYKc 204..443 CDD:214568 150/240 (63%)
ilkNP_956865.1 ANK 28..140 CDD:238125 68/111 (61%)
ANK repeat 33..64 CDD:293786 16/30 (53%)
Ank_2 38..130 CDD:289560 54/91 (59%)
ANK repeat 66..97 CDD:293786 19/30 (63%)
ANK repeat 99..130 CDD:293786 21/30 (70%)
Pkinase_Tyr 193..446 CDD:285015 153/252 (61%)
PK_ILK 197..449 CDD:270959 155/251 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573438
Domainoid 1 1.000 324 1.000 Domainoid score I1180
eggNOG 1 0.900 - - E2759_KOG0195
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3318
Inparanoid 1 1.050 570 1.000 Inparanoid score I1027
OMA 1 1.010 - - QHG58783
OrthoDB 1 1.010 - - D324283at33208
OrthoFinder 1 1.000 - - FOG0007245
OrthoInspector 1 1.000 - - oto40014
orthoMCL 1 0.900 - - OOG6_107009
Panther 1 1.100 - - LDO PTHR44329
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4351
SonicParanoid 1 1.000 - - X5350
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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