DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ilk and LIMK1

DIOPT Version :10

Sequence 1:NP_525001.2 Gene:Ilk / 53573 FlyBaseID:FBgn0028427 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster


Alignment Length:452 Identity:93/452 - (20%)
Similarity:163/452 - (36%) Gaps:121/452 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GHAKLVETLLQRGSRV----NATNMGDDIPLHLAAAHGHRDVVQMLIKERSDVNAVNEHGNTPLH 105
            |..:|.:|..::|::.    .|||....||    .|.|...:.|:..|||               
  Fly   309 GRERLYKTPGEQGTKARKLRQATNASTTIP----PAAGATAMTQLKEKER--------------- 354

  Fly   106 YACFWGYDMICEDLLNAGAQVGIANKDGHTPLEKAKPSL--AKRLQD--LVEKSGREVKVISFKE 166
                      |..|..      :.::........|.|.|  ..|.|.  :|:|..|..:      
  Fly   355 ----------CSSLSK------LLDEQHQAQQHSAHPQLYDLSRTQSCRVVQKPQRIFR------ 397

  Fly   167 QSWQGLKTRSRDATLSRFKGISMGDLDLHTKLSVTPSGETWRGRWQKNDVVAKILAVRQCTPRIS 231
                        ||          ||.:..||.....|:.::...:::..|..:..:.:......
  Fly   398 ------------AT----------DLVIGEKLGEGFFGKVFKVTHRQSGEVMVLKELHRADEEAQ 440

  Fly   232 RDFNEEFPKLRIFSHPNILPIIGACNSPPNLVTISQFMPRSSLFSLLHGATGVVVDTSQAVSFAL 296
            |:|.:|...||:..|.::|..||.......|..:::::....|..|:|. ...|:...|.|..|.
  Fly   441 RNFIKEVAVLRLLDHRHVLKFIGVLYKDKKLHMVTEYVAGGCLKELIHD-PAQVLPWPQRVRLAR 504

  Fly   297 DVARGMAFLHSLERIIPTYH--LNSHHVMIDDDLTARI-----------------NM-------- 334
            |:|.||::|||:..|    |  |||.:.::.:|.:..:                 ||        
  Fly   505 DIACGMSYLHSMNII----HRDLNSMNCLVREDRSVIVADFGLARSVDAPRLPSGNMTPGGYGSG 565

  Fly   335 --GDAKFS-----FQEKGR--------IYQPAWMSPETLQRKQADRNWEACDMWSFAILIWELTT 384
              .||..|     .:.|.|        :..|.||:||.::..:.|   |..|::||.|::.|:..
  Fly   566 ANSDAPMSPSGTLRRSKSRQRRQRYTVVGNPYWMAPEMMKGLKYD---EKVDVFSFGIMLCEIIG 627

  Fly   385 REVPFAEWSPMECGMKIALEGLRVKIPPGTSTHMAKLISICMNEDPGKRPKFDMVVPILEKM 446
            |.....::.|......:..:..|.|..........|:..:|.:.:|..||.|:.:...|:::
  Fly   628 RVEADPDFMPRNSDFSLNQQEFREKFCAQCPEPFVKVAFVCCDLNPDMRPCFETLHVWLQRL 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IlkNP_525001.2 ANKYR <1..162 CDD:440430 25/124 (20%)
ANK repeat 33..64 CDD:293786 5/22 (23%)
ANK repeat 66..97 CDD:293786 8/30 (27%)
ANK repeat 99..130 CDD:293786 2/30 (7%)
PK_ILK 196..446 CDD:270959 64/291 (22%)
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750
LIM2_LIMK 95..148 CDD:188751
PDZ_LIMK-like 169..274 CDD:467236
STKc_LIMK 407..693 CDD:271056 63/291 (22%)
Blue background indicates that the domain is not in the aligned region.

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