DRSC/TRiP Functional Genomics Resources

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Protein Alignment pins and ttc29

DIOPT Version :10

Sequence 1:NP_524999.2 Gene:pins / 53569 FlyBaseID:FBgn0040080 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001315084.1 Gene:ttc29 / 799981 ZFINID:ZDB-GENE-100922-181 Length:429 Species:Danio rerio


Alignment Length:284 Identity:71/284 - (25%)
Similarity:117/284 - (41%) Gaps:46/284 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 IEHH--QERLRIAR----EFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAV-----EL 291
            ::||  :..||.||    :.|.|.||  |.|.:|.:::..|..|.|.||.:....|..     :.
Zfish   133 MKHHFLELALRSARKVIMDSGKREAE--ARSLVGQAYLEKGDLELAQEHLEVFYQLTAGRTWQDS 195

  Fly   292 GEREVEAQSCYSLGNTYTLL-------HEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHS 349
            ..|...::||..|...|||:       .::..||:...:...||:|.|||..|..|.:.||.|:.
Zfish   196 NGRMQHSRSCEELQTVYTLMAQRSLQDQQYEQAIKMSRKAYTIAKESGDRALEGEAAYRLGLAYQ 260

  Fly   350 AIGGHERALKYAEQHLQLAKELHDPVGESTARVNISDLRKLLGMPDSEPSPTE---------EEA 405
            :.|..:.|:|:...::::|..|.|.  :|..|.: ..:.|.|   :||...||         |..
Zfish   261 STGDQKIAMKFLSSYMEIALTLEDT--DSLGRAH-EAMAKCL---ESEGKITEAIELWEKYVETC 319

  Fly   406 RSTASDHSASGNQSDGSE--NSQGRMVRVRRQSMEQLDLIKITPDGKRMQEEKLRAQATR----- 463
            :|:..|.:......:...  .||.|....|.......:|:.:....:|:||.::....||     
Zfish   320 KSSKHDQNLERAYMNLGHILKSQKRYGEARVYFERAFELVCLEGCPRRVQEAQVYVGITRALSTF 384

  Fly   464 ----KAKDDDFFEMLSRSQSKRMD 483
                |...|...:.|...:.:|.|
Zfish   385 PAYMKLIQDQNLDALLAWKDRRED 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pinsNP_524999.2 TPR 50..261 CDD:440225 10/28 (36%)
TPR repeat 83..109 CDD:276809
TPR repeat 120..150 CDD:276809
TPR 162..>373 CDD:440225 44/152 (29%)
TPR repeat 162..199 CDD:276809
TPR repeat 219..246 CDD:276809 2/9 (22%)
TPR repeat 251..291 CDD:276809 13/44 (30%)
TPR repeat 296..326 CDD:276809 8/36 (22%)
TPR repeat 338..366 CDD:276809 7/27 (26%)
GoLoco 468..488 CDD:460481 4/16 (25%)
GoLoco 552..573 CDD:460481
GoLoco 613..633 CDD:460481
ttc29NP_001315084.1 Spy 135..>358 CDD:443119 60/230 (26%)
TPR repeat 250..281 CDD:276809 8/30 (27%)
TPR repeat 286..324 CDD:276809 10/41 (24%)
TPR repeat 329..357 CDD:276809 4/27 (15%)
Blue background indicates that the domain is not in the aligned region.

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