Sequence 1: | NP_001247347.1 | Gene: | larp / 53567 | FlyBaseID: | FBgn0261618 | Length: | 1673 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_201411.2 | Gene: | LARP1b / 836742 | AraportID: | AT5G66100 | Length: | 453 | Species: | Arabidopsis thaliana |
Alignment Length: | 437 | Identity: | 104/437 - (23%) |
---|---|---|---|
Similarity: | 174/437 - (39%) | Gaps: | 99/437 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 436 TKKQQSAKTAAAVAASSNTTSSE--------VATESNVAGTTSSSNSNPSSSTTTTNTTTNSQAT 492
Fly 493 TAPVASTSHDAKAQRDAEPAANSAAGTTGTAAGPALTKKIPKHKWRPLPIDLAKSSRPKPIGGRP 557
Fly 558 NRRFSDDIADQRRPPRVYHDRQPGA-GGAGV------ESRHPHAGRHPYGSRPATATSERVDSWR 615
Fly 616 SSSSTTTAA----FDEQRSGAAGGAGAAGT--------GVGSATRGPRRY---RTPYRGGRQGRG 665
Fly 666 GFSRQG---------PGRPTYRI-PRHLLASGEY----ANYLPADAAGA-------DSQSSYVLM 709
Fly 710 GTH-----------------YFGNVPAAYIELDANSIKEAIKKQVEYYFSVDNLTGDFFLRRKMD 757
Fly 758 PEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDKLELFEGYKVRTK 804 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
larp | NP_001247347.1 | LARP_1_2 | 730..803 | CDD:153403 | 30/72 (42%) |
DM15 | 1341..1382 | CDD:128927 | |||
DM15 | 1383..1421 | CDD:128927 | |||
LARP1b | NP_201411.2 | LAM | 336..409 | CDD:153396 | 31/73 (42%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5193 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001290 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |