Sequence 1: | NP_001247347.1 | Gene: | larp / 53567 | FlyBaseID: | FBgn0261618 | Length: | 1673 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001281074.1 | Gene: | SSB / 6741 | HGNCID: | 11316 | Length: | 408 | Species: | Homo sapiens |
Alignment Length: | 376 | Identity: | 81/376 - (21%) |
---|---|---|---|
Similarity: | 136/376 - (36%) | Gaps: | 107/376 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 728 SIKEAIKKQVEYYFSVDNLTGDFFLRR--KMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES 790
Fly 791 DKLELFEGYKVRTKTTPTTWPITEVPEV-----NEGEPKAI--------GTLEQEQLEQNDGQEK 842
Fly 843 LEEQTEA--------------DSPPPILTSAMATKPLNSIP------------------PPPMPR 875
Fly 876 NPQNLVPKMLQDKQQSRSSTIAALNSVNAISALTQQVEGGAAELAGHLS---------------- 924
Fly 925 ---------GLAESV---KPKSTSTPDKRNAASAGNGAGSAAALVAEPEGIWKEVKRRSKTNAIK 977
Fly 978 ENATTPPQQQQPPLSQTLNNNNDNVKTNNTSSKSKSSSNNAPSNASSSATV 1028 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
larp | NP_001247347.1 | LARP_1_2 | 730..803 | CDD:153403 | 31/74 (42%) |
DM15 | 1341..1382 | CDD:128927 | |||
DM15 | 1383..1421 | CDD:128927 | |||
SSB | NP_001281074.1 | LARP_3 | 10..91 | CDD:153397 | 33/80 (41%) |
RRM1_La | 112..183 | CDD:240737 | 10/77 (13%) | ||
RRM_3 | 231..334 | CDD:370115 | 19/120 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 329..408 | 7/35 (20%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5193 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |