Sequence 1: | NP_001247347.1 | Gene: | larp / 53567 | FlyBaseID: | FBgn0261618 | Length: | 1673 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102652.1 | Gene: | RGD1565989 / 499603 | RGDID: | 1565989 | Length: | 274 | Species: | Rattus norvegicus |
Alignment Length: | 286 | Identity: | 145/286 - (50%) |
---|---|---|---|
Similarity: | 174/286 - (60%) | Gaps: | 49/286 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 1290 LDTVEHRPRTTSMGSSAGTSPT--ASSYGSFGSSVPQSLPVFQHPSHALLKENNFTQQAYHKYHS 1352
Fly 1353 RCLKERRRLGYGQSQEMNTLYRFWSFFLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRFFSY 1417
Fly 1418 GLEKKFRPNIYQDFQDETIADYETGQLYGLEKFWAFLKYYKNGEKLEVQPKLAEYLKSFKNIEDF 1482
Fly 1483 RVVEPEINEMLQGVGSLNPGRQLNRHRSVSESDG-------------TAVIAAGGRRL------- 1527
Fly 1528 -------------NTTITNRSDYVGR 1540 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
larp | NP_001247347.1 | LARP_1_2 | 730..803 | CDD:153403 | |
DM15 | 1341..1382 | CDD:128927 | 31/40 (78%) | ||
DM15 | 1383..1421 | CDD:128927 | 26/37 (70%) | ||
RGD1565989 | NP_001102652.1 | DM15 | 53..93 | CDD:128927 | 31/39 (79%) |
DM15 | 94..132 | CDD:128927 | 26/37 (70%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D258488at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |