Sequence 1: | NP_001247347.1 | Gene: | larp / 53567 | FlyBaseID: | FBgn0261618 | Length: | 1673 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001286419.1 | Gene: | Achl / 36605 | FlyBaseID: | FBgn0033936 | Length: | 867 | Species: | Drosophila melanogaster |
Alignment Length: | 596 | Identity: | 124/596 - (20%) |
---|---|---|---|
Similarity: | 196/596 - (32%) | Gaps: | 202/596 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 724 LDANSIKEAIKKQVEYYFSVDNLTGDFFLRR--KMDPEGYIPVTLIASFHRVLALTTDVAVIVNA 786
Fly 787 I-KESDKLELFE-GYKVRTKTTPTTWPITEVPEVNEGEPK---AIGTLEQEQLEQNDGQEKLEEQ 846
Fly 847 TEADSPPPILTSAMATKPLNSIPPPPMPRNPQNLVPKMLQDKQQSRSSTIAALNSVNAISALTQQ 911
Fly 912 VEGGAAELAGHLSG---LAESVKPKS--------------------------------------- 934
Fly 935 --TSTPD-----KRN--------------------------AASAGNGAGSAAALVAEPEGIWKE 966
Fly 967 VKRR-SKTNAIKENATTPPQQQQPPLSQTLNNNND--------------NVKTNNTSSKSKSSSN 1016
Fly 1017 NAPSNASSSATV-----------CVTTNNASSATKAT----TKTTTTSTATTTTNN-----NIKS 1061
Fly 1062 GNAAYSKTHSKSSSKTA--APPSAQCHAEKEELDFQFDEELMDPLPPGTG---------RINNF- 1114
Fly 1115 --TENFSDDDESDYEFADRDINKLLIVAQVG--RAPKHEGYDRTADFTS-------RTKITQDLE 1168
Fly 1169 NIINDGLVNYE 1179 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
larp | NP_001247347.1 | LARP_1_2 | 730..803 | CDD:153403 | 27/76 (36%) |
DM15 | 1341..1382 | CDD:128927 | |||
DM15 | 1383..1421 | CDD:128927 | |||
Achl | NP_001286419.1 | LARP_6 | 282..359 | CDD:153402 | 27/76 (36%) |
RRM_LARP6 | 373..472 | CDD:240735 | 27/124 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45456181 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5193 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR22792 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.930 |