Protein Alignment larp and ssb

DIOPT Version :9

• Sequence 1: NP_001247347.1
• Gene: larp / 53567
• FlyBaseID: FBgn0261618
• Length: 1673
• Species: Drosophila melanogaster
• Sequence 2: NP_955841.1
• Gene: ssb / 321504
• ZFINID: ZDB-GENE-030131-223
• Length: 401
• Species: Danio rerio
• Alignment Length: 97
• Identity: 30/97 - (30%)
• Similarity: 58/97 - (59%)
• Gaps: 4/97 - (4%)

  Fly   725 DANSIKEAIKKQVEYYFSVDNLTGDFFLRRKMD-PEGYIPVTLIASFHRVLALTTDVAVIVNAIK 788
            :.:.:::.:.:|:||||...||..|.||:.::. .:|::|:..:..|:|:.:||::.:|||.::.
Zfish     6 EMSPLEKKVAEQIEYYFGDHNLPRDKFLKEQLQLDDGWVPLETMLKFNRLKSLTSEESVIVESLL 70

  Fly   789 ESDKLELFEGYKVRTKTTPTTWPITEVPEVNE 820
            :| |..|.|..:.:||....  |...:||.||
Zfish    71 KS-KTGLLEISEDKTKIRRD--PNKPLPENNE 99

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
larp	NP_001247347.1	LARP_1_2	730..803	CDD:153403	23/73 (32%)
		DM15	1341..1382	CDD:128927
		DM15	1383..1421	CDD:128927
ssb	NP_955841.1	LARP_3	7..88	CDD:153397	25/81 (31%)
		RRM1_La	109..181	CDD:240737
		RRM_3	229..326	CDD:285930

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5193
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900