Sequence 1: | NP_001247347.1 | Gene: | larp / 53567 | FlyBaseID: | FBgn0261618 | Length: | 1673 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038958171.1 | Gene: | Larp1b / 310348 | RGDID: | 1307509 | Length: | 537 | Species: | Rattus norvegicus |
Alignment Length: | 705 | Identity: | 180/705 - (25%) |
---|---|---|---|
Similarity: | 248/705 - (35%) | Gaps: | 234/705 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 139 PRDQQPAGGRGDGQKPQQAGGRRV--PGSSDTERKSVRPRAPRGGSPRKSAAGAAGAAGSNAGAV 201
Fly 202 -------SSAVPGGP-KVHKDRKDTSPSASIEGAGSSGNEAKSADGDQQAGEKGAAGAAPPPKRF 258
Fly 259 IAAPPPKVNAWKISAKQSGSPKAGTSPLDKRVLQPKAQQQQQQTKQTASQNNNAQNTASNKKTQQ 323
Fly 324 QQQPQQGATTTTQTTTAAAAAATAAAAATAATTSAAAATSSAAAVPAATTETATTTTVDASQADA 388
Fly 389 LAKVVVKDKKKVNQKASDFSNVGDWPT---LIGGTSGSGKATSNEPKRNPTKKQQSAKTAAAVAA 450
Fly 451 SSNTTSSEVATESNVAGTTSSSNSNPSSSTTTTNTTTNSQA-TTAPVASTSHDAKAQRDAEPAAN 514
Fly 515 SAAGTTGTAAGPALTKKIPKHKWRPLPIDLAKSSRPKPIGGRPNRRFSDDIADQRRPPRVYHDRQ 579
Fly 580 PGAGGAGVESR-HPHAGRHPYGSRPATATSERVDSWRSSSSTTTAAFDEQRSGAAGGAGAAGTGV 643
Fly 644 GSATRGPRRYRTPYRGGRQGRG--------GFSRQGPGRPTYR-IPRHLLASGEYANYLPADAAG 699
Fly 700 ADSQSSYVLMGTHYFGNVPAAYIELDANSIKEAIKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPV 764
Fly 765 TLIASFHRVLALTTDVAVIVNAIKESDKLELFEGYKVRTKTTPTTWPITEVPEVN 819 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
larp | NP_001247347.1 | LARP_1_2 | 730..803 | CDD:153403 | 40/72 (56%) |
DM15 | 1341..1382 | CDD:128927 | |||
DM15 | 1383..1421 | CDD:128927 | |||
Larp1b | XP_038958171.1 | LARP_2 | 418..490 | CDD:153407 | 40/72 (56%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166345245 | |
Domainoid | 1 | 1.000 | 89 | 1.000 | Domainoid score | I7679 |
eggNOG | 1 | 0.900 | - | - | E1_COG5193 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D258488at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001290 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_103868 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.740 |