Sequence 1: | NP_001247347.1 | Gene: | larp / 53567 | FlyBaseID: | FBgn0261618 | Length: | 1673 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012814168.1 | Gene: | larp1 / 100216225 | XenbaseID: | XB-GENE-6039336 | Length: | 1016 | Species: | Xenopus tropicalis |
Alignment Length: | 1416 | Identity: | 444/1416 - (31%) |
---|---|---|---|
Similarity: | 578/1416 - (40%) | Gaps: | 489/1416 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 205 VPGGPKVHKDRKDTSPSASIEGAGSSGNEAKSADGDQ-QAGEKGAAGAAPPP--KRFIAAPPPKV 266
Fly 267 NAWKISAKQSGSPKAGTSPLDKRVLQPKAQQQQQQTKQTASQNNNAQNTASNKKTQQQQQPQQGA 331
Fly 332 TTTTQTTTAAAAAATAAAAATAATTSAAAATSSAAAVPAATTETATTTTVDASQADALAKVVVKD 396
Fly 397 KKKVNQKASDFSNVGDWPTLIGGTSGSGKATSNEPKRNPTKKQQSAKTAAAVAASSNTTSSEVAT 461
Fly 462 ESNVAGTTSSSNSNPSSSTTTTNTTTNSQATTAPVASTSHDAKAQRDAE-----PAANSAAGTTG 521
Fly 522 TAAGPALTKKIPKHKWRPLPIDLAKSSRPKPIGGRPNRRFSDDIADQRRPPRVYHDRQPGAGGAG 586
Fly 587 VESRHPHAGRHPYG-SRPATA----TSERVDSWRSSSSTTTAAFDEQRSGAAGGA---GAAGTGV 643
Fly 644 GSATRGPRRYRTPYRGGRQGRGGFSRQGPGRPTYRIPRHLLASGEYANYLPADAAGADSQSSYVL 708
Fly 709 MGTHYFGNVPAAYI-ELDANSIKEAIKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHR 772
Fly 773 VLALTTDVAVIVNAIKESDKLELFEGYKVRTKTTPTTWPITEVPEVNEGEPKAIGTLEQEQLEQN 837
Fly 838 DGQEKLEEQTEADSPPPILTSAMATKPLNSIPPPPMPRNPQNLVPKMLQDKQQSRSSTIAALNSV 902
Fly 903 NAIS-ALTQQVEGGAAELAGHLSGLAESVKPKSTSTPDKRNAASAGNGAGSAAALVAEPEGIWKE 966
Fly 967 VKRRSKTNAIKENATTPPQQQQPPLSQTLNNNNDNVKTNNTSSKSKSSSNNAPSNASSSATVCVT 1031
Fly 1032 TNNASSATKATTKTTTTSTATTTTNNNIKSGNAAYSKTHSKSSSKTAAPPSAQCHAEKEELDFQF 1096
Fly 1097 DEEL--MDPLPPGTGRINNFTENFSDDDESDYEFADRDINKLLIVAQVGRA-PKHEGYDRTADFT 1158
Fly 1159 SRTKITQDLENIINDGLVNYEEDLWT---------TTNVVADYKTVNVISQADFEKLAGGRNKSV 1214
Fly 1215 LPPQVVPP-PPPFE----EDLDETLVG---DTTLNSTLNNTLKS----RRA-------------- 1253
Fly 1254 ----RFY-AAPNSHSIDPRTPRKRKLRHTANPPVEAHVGWLLDTVEHRPRTTSMGSSAGTSPTAS 1313
Fly 1314 SYGSFGSSVPQSLPVFQHPSHALLKENNFTQQAYHKYHSRCLKERRRLGYGQSQEMNTLYRFWSF 1378
Fly 1379 FLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRFFSYGLEKKFRPNIYQDFQDETIADYETGQ 1443
Fly 1444 LYGLEKFWAFLKYYKNGEKLEVQPKLAEYLKSFKNIEDFRVVEPEINEMLQGVG----SLNPGRQ 1504
Fly 1505 LNRHRSVSESDGTAVIAAGGRRLNTTITNRSDYVGRLLQQQHQQQQQQQHH 1555 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
larp | NP_001247347.1 | LARP_1_2 | 730..803 | CDD:153403 | 46/72 (64%) |
DM15 | 1341..1382 | CDD:128927 | 31/40 (78%) | ||
DM15 | 1383..1421 | CDD:128927 | 26/37 (70%) | ||
larp1 | XP_012814168.1 | LAM | 325..397 | CDD:383107 | 46/72 (64%) |
DM15 | 807..847 | CDD:128927 | 31/39 (79%) | ||
DM15 | 848..886 | CDD:128927 | 26/37 (70%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 416 | 1.000 | Domainoid score | I656 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 506 | 1.000 | Inparanoid score | I1300 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D258488at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001290 | |
OrthoInspector | 1 | 1.000 | - | - | otm47717 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR22792 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2271 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.160 |