Sequence 1: | NP_001247347.1 | Gene: | larp / 53567 | FlyBaseID: | FBgn0261618 | Length: | 1673 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001121461.1 | Gene: | larp1b / 100158557 | XenbaseID: | XB-GENE-5737452 | Length: | 991 | Species: | Xenopus tropicalis |
Alignment Length: | 1291 | Identity: | 394/1291 - (30%) |
---|---|---|---|
Similarity: | 539/1291 - (41%) | Gaps: | 424/1291 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 292 QPKAQQQQQQTKQTASQNNNAQNTASNKKTQQQQQPQQGATTTTQTTTAAAAAATAAAAATAATT 356
Fly 357 SAAAATSSAAAVPAATTETATTTTV---DASQADALAKVVVKDKKKVNQKASDFSNVGDWPTLIG 418
Fly 419 GTSGSGKATSNEPKRNPTKKQQSAKTAAA--VAASSNTTSSEVATE-SNVAGTTSSSNSNPSSST 480
Fly 481 TTTNTTTNSQATTAPVASTSHDAKAQRDAEPAANSAAGTTGTAAGPALTKKIPKHKWRPLPIDLA 545
Fly 546 KSSRPKPIGGRPNRRFSDDIADQRRPPRVYHDRQPGAGGAGVESRHPHAGRHPYGSRPATATSER 610
Fly 611 VDSWRSSSSTTTAAFDEQRSGAAGGAGAAGTGVGSATRGPRRYRTPYRGGRQGRGGFSRQGPGRP 675
Fly 676 ----TYRIPRHLLASGEYANYLPADAAGADSQSSYVLMGT--HYFGNVPAAYIELDANSIKEAIK 734
Fly 735 KQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDKLELFEGY 799
Fly 800 KVRTKTTPTTWPITEVPEVNEGEPKAIGTLEQEQLEQNDGQ-----------EKLEEQTEADSPP 853
Fly 854 PILTSAMATKPLNSIPPPPMPRNPQNLVPKMLQDKQQSRSSTIAALNSVNAISALTQQVEGGAAE 918
Fly 919 LAGHLSGLAESVKPK--STSTPDKRNAASAGNGAGSAAALVAEPEGIWKEVKRRSKTNAIKENAT 981
Fly 982 TPPQQQQPPLSQTLNNNNDNVKTNNTSSKSKSSSNNAPSNASSSATVCVTTNNASSATKATTKTT 1046
Fly 1047 TTSTATTTTNNNIKSGNAAYSKTHSKSSSKTAAPPSAQCHAEKEELDFQFDEELMDPLPPGTGRI 1111
Fly 1112 NNFTENFSDDDESDYEFADRDINKLLIVAQV-GRAPKHEGYDRTADFTSRTKITQDLENIINDGL 1175
Fly 1176 VNYEEDLW---------TTTNVVADYKTVNVISQADFEKLAG----GRNKSVLPPQVVPPPPPFE 1227
Fly 1228 EDLDETLVGDTTLN-----------STLNNTLKSRRA----------RFY-AAPNSHSIDPRTPR 1270
Fly 1271 KRKLRHTANPPVEAHVGWLLDTVEHRPRTTSMGSS-AGTSPTASSYGSFGSSVPQSLPVFQHPSH 1334
Fly 1335 ALLKENNFTQQAYHKYHSRCLKERRRLGYGQSQEMNTLYRFWSFFLRENFNKSMYNEFRSLALED 1399
Fly 1400 AGNGFRYGLECLFRFFSYGLEKKFRPNIYQDFQDETIADYETGQLYGLEKFWAFLKYYKNGEKLE 1464
Fly 1465 VQPKLAEYLKSFKNIEDFRVVEP--EINEMLQGVGSLNPGRQLNRHRSVSESDGTA 1518 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
larp | NP_001247347.1 | LARP_1_2 | 730..803 | CDD:153403 | 38/72 (53%) |
DM15 | 1341..1382 | CDD:128927 | 31/40 (78%) | ||
DM15 | 1383..1421 | CDD:128927 | 26/37 (70%) | ||
larp1b | NP_001121461.1 | DM15 | 777..817 | CDD:128927 | 31/39 (79%) |
DM15 | 818..856 | CDD:128927 | 26/37 (70%) | ||
LARP_2 | 307..379 | CDD:153407 | 38/72 (53%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 416 | 1.000 | Domainoid score | I656 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 506 | 1.000 | Inparanoid score | I1300 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D258488at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001290 | |
OrthoInspector | 1 | 1.000 | - | - | otm47717 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2271 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.060 |