DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kat60 and RPT1

DIOPT Version :10

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_012777.1 Gene:RPT1 / 853712 SGDID:S000001628 Length:467 Species:Saccharomyces cerevisiae


Alignment Length:525 Identity:139/525 - (26%)
Similarity:225/525 - (42%) Gaps:114/525 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 PLRKGKWSMINQQISQEH-AKIKAIQRTLQDISLDLQSTKFAHKLRHQLSEESTTSKDPSAWFKP 166
            ||.:|...::....:..: ||:|..:..|:||...::.....        :||.|...||     
Yeast    28 PLTEGDIQVLKSYGAAPYAAKLKQTENDLKDIEARIKEKAGV--------KESDTGLAPS----- 79

  Fly   167 DPDIWTPPPKDPDVWGPPKPPPTTQAVGRRAAPNNRRTTPATQNSRPSSTIPQSTARNGPASTRN 231
              .:|       |:.|      ..|.:|........|.|...:.:..|.........:|.:::.:
Yeast    80 --HLW-------DIMG------DRQRLGEEHPLQVARCTKIIKGNGESDETTTDNNNSGNSNSNS 129

  Fly   232 SRNSTSATAPSGGARTTNGRAGGRKLSTSNTNEARDDDSTAAGNNGGAA----GDGENGDPQAAQ 292
            ::.||.|                         :..|:|:....|....|    |.||...|...:
Yeast   130 NQQSTDA-------------------------DEDDEDAKYVINLKQIAKFVVGLGERVSPTDIE 169

  Fly   293 E------EERKFQPNNHIEAELVDILERDI----LQKDPKVRWSDIADLHDAKRLLEEAVVLPML 347
            |      :..|:    :||..|...::..:    :::.|.|.:||:....|....|.|.|.||:|
Yeast   170 EGMRVGVDRSKY----NIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLL 230

  Fly   348 MPDYFK--GIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSATLTSKYRGESEKMVRLL 410
            .|:.|.  ||..| ||:|:.||||||||:.|:|||.....||..|..:.|..||.||..:|||.|
Yeast   231 SPERFATLGIDPP-KGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVREL 294

  Fly   411 FEMARFYAPSTIFIDEIDSLCSRR---GSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLAA 472
            |||||......||.||||::...|   |:..::|. :|...||:.|:||.    :....:.|:.|
Yeast   295 FEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEV-QRTMLELITQLDGF----DPRGNIKVMFA 354

  Fly   473 TNFPWDIDEALRR--RLEKRIYIPLPSDEGREALLKINLREVKVDDSVDLTYVANELKGYSGADI 535
            ||.|..:|.||.|  |:::::...||..|||..:.:|:.:.:.|:..:....::......:||::
Yeast   355 TNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAEL 419

  Fly   536 TNVCREASMMSMRRKIAGLTPEQIRQLATEEVDLPVSNKDFNEAMSRCNKSVSRADLDKYEKWMR 600
            .:||.||.|.::|.:         |::|||        |||.:|            :||.....:
Yeast   420 RSVCTEAGMFAIRAR---------RKVATE--------KDFLKA------------VDKVISGYK 455

  Fly   601 EFGSS 605
            :|.|:
Yeast   456 KFSST 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 Kp60-NTD 62..129 CDD:439297 6/26 (23%)
PHA03291 <167..>253 CDD:223033 12/85 (14%)
SpoVK 219..566 CDD:440232 108/367 (29%)
RecA-like_KTNA1 327..493 CDD:410930 70/172 (41%)
Vps4_C <570..603 CDD:462762 6/32 (19%)
RPT1NP_012777.1 PRK03992 154..466 CDD:179699 109/346 (32%)

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