DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kat60 and RPT6A

DIOPT Version :10

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_568389.1 Gene:RPT6A / 832121 AraportID:AT5G19990 Length:419 Species:Arabidopsis thaliana


Alignment Length:281 Identity:109/281 - (38%)
Similarity:162/281 - (57%) Gaps:20/281 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 LVDILERDILQKDPKVRWSDIADLHDAKRLLEEAVVLPMLMPDYFK--GIRRPWKGVLMVGPPGT 370
            ||::::   ::|.|...:..|..|....:.::|.:.||:..|:.|:  ||.:| ||||:.|||||
plant   146 LVNLMK---VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP-KGVLLYGPPGT 206

  Fly   371 GKTMLAKAVATECGTTFFNVSSATLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDSLCSRR- 434
            |||:||:|||.....||..||.:.|..||.||..:|||.||.|||.:|||.||:|||||:.|.| 
plant   207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271

  Fly   435 --GSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLAATNFPWDIDEALRR--RLEKRIYIPL 495
              ||.:.....:|...|||.|:||.    |.:..:.||.|||....:|:||.|  |::::|..|.
plant   272 ESGSGNGDSEVQRTMLELLNQLDGF----EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332

  Fly   496 PSDEGREALLKINLREVKVDDSVDLTYVANELKGYSGADITNVCREASMMSMRRKIAGLTPEQIR 560
            |::|.|..:|||:.|::.:...:||..:|.::.|.|||::..||.||.|.::|.:...:|.|...
plant   333 PNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFE 397

  Fly   561 QLATEEVDLPVSNKDFNEAMS 581
            ....:     |..||..:.||
plant   398 MAVAK-----VMKKDTEKNMS
 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 Kp60-NTD 62..129 CDD:439297
PHA03291 <167..>253 CDD:223033
SpoVK 219..566 CDD:440232 104/264 (39%)
RecA-like_KTNA1 327..493 CDD:410930 77/172 (45%)
Vps4_C <570..603 CDD:462762 5/12 (42%)
RPT6ANP_568389.1 PRK03992 36..413 CDD:179699 107/279 (38%)
Blue background indicates that the domain is not in the aligned region.

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