DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kat60 and RPT2b

DIOPT Version :10

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_179604.1 Gene:RPT2b / 816533 AraportID:AT2G20140 Length:443 Species:Arabidopsis thaliana


Alignment Length:357 Identity:106/357 - (29%)
Similarity:177/357 - (49%) Gaps:63/357 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 GRKLSTSNTNEARDDDSTAAGNNGGAAGDGENGDPQ-----AAQEEERKFQP------NNHIEAE 307
            |..:|..|..|..|::.....::.|         |:     .:..::.:.:|      :|.: ..
plant   107 GTPMSVGNLEELIDENHAIVSSSVG---------PEYYVGILSFVDKDQLEPGCSILMHNKV-LS 161

  Fly   308 LVDILERDI--------LQKDPKVRWSDIADLHDAKRLLEEAVVLPMLMPDYFK--GIRRPWKGV 362
            :|.||:.::        ::|.|...::||..|....:.::|||.||:..|:.::  ||:.| |||
plant   162 VVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPP-KGV 225

  Fly   363 LMVGPPGTGKTMLAKAVATECGTTFFNVSSATLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEI 427
            ::.|.||||||:||||||.....||..|..:.|..||.|:..|:||.||.:|...:||.:|||||
plant   226 ILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEI 290

  Fly   428 DSLCSRR-----GSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLAATNFPWDIDEALRR-- 485
            |::.::|     |.|.|   .:|...|||.|:||.....:    |.|:.|||....:|.||.|  
plant   291 DAVGTKRYDANSGGERE---IQRTMLELLNQLDGFDSRGD----VKVILATNRIESLDPALLRPG 348

  Fly   486 RLEKRIYIPLPSDEGREALLKINLREVKVDDSVDLTYVANELKGYSGADITNVCREASMMSMRRK 550
            |::::|..|||..:.|..:.:|:..::.:.:.|:|.........:|||||..:|.||.::::|  
plant   349 RIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALR-- 411

  Fly   551 IAGLTPEQIRQLATEEVDLPVSNKDFNEAMSR 582
                           |..:.|::.||.:|..:
plant   412 ---------------ERRMKVTHVDFKKAKEK 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 Kp60-NTD 62..129 CDD:439297
PHA03291 <167..>253 CDD:223033
SpoVK 219..566 CDD:440232 101/339 (30%)
RecA-like_KTNA1 327..493 CDD:410930 71/174 (41%)
Vps4_C <570..603 CDD:462762 4/13 (31%)
RPT2bNP_179604.1 PTZ00361 7..443 CDD:185575 106/357 (30%)
Blue background indicates that the domain is not in the aligned region.

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