DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kat60 and vps4a

DIOPT Version :10

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001070077.1 Gene:vps4a / 767670 ZFINID:ZDB-GENE-060929-388 Length:440 Species:Danio rerio


Alignment Length:344 Identity:142/344 - (41%)
Similarity:199/344 - (57%) Gaps:52/344 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 RAGGRKLSTSNTNEARDDDSTAAGNNGGAAGDGENGDPQAAQEEERKFQPNNHIEAELVDILERD 315
            :.|.:.:..:.:|:..|.||           :|||.:.:..||         |:...:|      
Zfish    79 KQGKKPVKETQSNDKSDSDS-----------EGENPEKKKLQE---------HLMGAIV------ 117

  Fly   316 ILQKDPKVRWSDIADLHDAKRLLEEAVVLPMLMPDYFKGIRRPWKGVLMVGPPGTGKTMLAKAVA 380
              .:.|.|||||:|.|..||..|:|||:||:..|..|.|.|.||:|:|:.|||||||:.||||||
Zfish   118 --MEKPNVRWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVA 180

  Fly   381 TEC-GTTFFNVSSATLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASR 444
            ||. .:|||:|||:.|.||:.|||||:|:.||::||.:.||.|||||:||||..| :|:|.||:|
Zfish   181 TEANNSTFFSVSSSDLMSKWLGESEKLVKNLFDLARQHKPSIIFIDEVDSLCGSR-NENESEAAR 244

  Fly   445 RVKSELLVQMDGVGGGEEQAKVVMVLAATNFPWDIDEALRRRLEKRIYIPLPSDEGREALLKINL 509
            |:|:|.||||.|||...:.   ::||.|||.||.:|.|:|||.|||||||||.:..|.|:.:::|
Zfish   245 RIKTEFLVQMQGVGNNNDG---ILVLGATNIPWVLDAAIRRRFEKRIYIPLPEEPARSAMFRLHL 306

  Fly   510 REVKVD-DSVDLTYVANELKGYSGADITNVCREASMMSMRRKIAGLTPEQIRQLATEEVDLPVSN 573
            ...... ...||..:|.:..|||||||:.:.|:|.|..:|:..:....:::|             
Zfish   307 GNTPHSLTEADLRQLARKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVR------------- 358

  Fly   574 KDFNEAMSRCNKSVSRADL 592
                 ..||.|.:|...||
Zfish   359 -----GPSRSNSAVIVDDL 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 Kp60-NTD 62..129 CDD:439297
PHA03291 <167..>253 CDD:223033 0/1 (0%)
SpoVK 219..566 CDD:440232 136/316 (43%)
RecA-like_KTNA1 327..493 CDD:410930 96/166 (58%)
Vps4_C <570..603 CDD:462762 6/23 (26%)
vps4aNP_001070077.1 MIT_VPS4 4..79 CDD:239141 142/344 (41%)
RecA-like_VPS4 120..290 CDD:410929 101/173 (58%)
AAA_lid_3 317..358 CDD:465537 14/40 (35%)
Vps4_C 373..>403 CDD:462762 142/344 (41%)
Blue background indicates that the domain is not in the aligned region.

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