DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kat60 and SPAST

DIOPT Version :10

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_055761.2 Gene:SPAST / 6683 HGNCID:11233 Length:616 Species:Homo sapiens


Alignment Length:414 Identity:154/414 - (37%)
Similarity:235/414 - (56%) Gaps:35/414 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 AAPNNRRTTPATQNSRPSSTIPQSTARNGPASTRNSRNSTSATAPSGGARTTNGRAGGRKLSTSN 261
            |.|..:.....|.||.|.|.....|...| .|..:...|.|..:...|.:..:|.|......|..
Human   231 AVPKRKDPLTHTSNSLPRSKTVMKTGSAG-LSGHHRAPSYSGLSMVSGVKQGSGPAPTTHKGTPK 294

  Fly   262 TNEARDDDSTAAGNNGGAAGDGENGDPQAAQEEERKFQPNNHIEAELVDILERDILQKDPKVRWS 326
            ||......:                 |..|..:::..:...::::.|.:::..:|:.....|::.
Human   295 TNRTNKPST-----------------PTTATRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFD 342

  Fly   327 DIADLHDAKRLLEEAVVLPMLMPDYFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVS 391
            |||....||:.|:|.|:||.|.|:.|.|:|.|.:|:|:.||||.||||||||||.|...||||:|
Human   343 DIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNIS 407

  Fly   392 SATLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDS-LCSRRGSESEHEASRRVKSELLVQMD 455
            :|:|||||.||.||:||.||.:||...||.|||||:|| ||.||  |.||:||||:|:|.|::.|
Human   408 AASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERR--EGEHDASRRLKTEFLIEFD 470

  Fly   456 GV-GGGEEQAKVVMVLAATNFPWDIDEALRRRLEKRIYIPLPSDEGREALLKINL--REVKVDDS 517
            || ..|:::   |:|:.|||.|.::|||:.||..||:|:.||::|.|..||| ||  ::......
Human   471 GVQSAGDDR---VLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLK-NLLCKQGSPLTQ 531

  Fly   518 VDLTYVANELKGYSGADITNVCREASMMSMRRKIAGLTPEQIRQLATEEV-DLPVSNKDFNEAMS 581
            .:|..:|....||||:|:|.:.::|::..:|.    |.|||::.::..|: ::.:|  ||.|::.
Human   532 KELAQLARMTDGYSGSDLTALAKDAALGPIRE----LKPEQVKNMSASEMRNIRLS--DFTESLK 590

  Fly   582 RCNKSVSRADLDKYEKWMREFGSS 605
            :..:|||...|:.|.:|.::||.:
Human   591 KIKRSVSPQTLEAYIRWNKDFGDT 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 Kp60-NTD 62..129 CDD:439297
PHA03291 <167..>253 CDD:223033 14/55 (25%)
SpoVK 219..566 CDD:440232 134/350 (38%)
RecA-like_KTNA1 327..493 CDD:410930 94/167 (56%)
Vps4_C <570..603 CDD:462762 10/32 (31%)
SPASTNP_055761.2 Required for interaction with RTN1. /evidence=ECO:0000269|PubMed:16602018 1..300 18/69 (26%)
Required for midbody localization. /evidence=ECO:0000269|PubMed:18997780 1..194
Required for interaction with ATL1. /evidence=ECO:0000269|PubMed:16339213, ECO:0000269|PubMed:16815977 1..80
Required for nuclear localization. /evidence=ECO:0000269|PubMed:15147984 1..50
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
Nuclear localization signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03021, ECO:0000269|PubMed:15147984 4..11
Required for interaction with SSNA1 and microtubules. /evidence=ECO:0000269|PubMed:15269182 50..87
Nuclear export signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03021, ECO:0000269|PubMed:16026783 59..67
Sufficient for interaction with CHMP1B. /evidence=ECO:0000269|PubMed:18997780 112..196
Required for interaction with microtubules. /evidence=ECO:0000269|PubMed:15269182 114..200
MIT_spastin 116..195 CDD:239142
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 224..266 10/35 (29%)
Sufficient for microtubule severing. /evidence=ECO:0000269|PubMed:15269182 228..616 154/414 (37%)
Required for interaction with microtubules and microtubule severing. /evidence=ECO:0000269|PubMed:15269182 270..328 10/74 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 278..312 7/50 (14%)
Nuclear localization signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03021, ECO:0000269|PubMed:15147984 309..312 0/2 (0%)
Required for interaction with microtubules. /evidence=ECO:0000269|PubMed:23272056 310..312 0/1 (0%)
RecA-like_spastin 343..506 CDD:410932 94/167 (56%)
AAA_lid_3 533..587 CDD:465537 18/59 (31%)
Vps4_C <580..612 CDD:462762 10/33 (30%)
Blue background indicates that the domain is not in the aligned region.

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